Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SCAF1Q9H7N4 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC23.59■■□□□ 1.37
SCAF1Q9H7N4 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
SCAF1Q9H7N4 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC23.59■■□□□ 1.37
SCAF1Q9H7N4 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SCAF1Q9H7N4 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SCAF1Q9H7N4 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC23.59■■□□□ 1.37
SCAF1Q9H7N4 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
SCAF1Q9H7N4 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SCAF1Q9H7N4 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
SCAF1Q9H7N4 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SCAF1Q9H7N4 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC23.59■■□□□ 1.37
SCAF1Q9H7N4 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC23.59■■□□□ 1.37
SCAF1Q9H7N4 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
SCAF1Q9H7N4 MTCYBP32-201ENST00000427945 1084 ntBASIC23.59■■□□□ 1.37
SCAF1Q9H7N4 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC23.59■■□□□ 1.37
SCAF1Q9H7N4 AC012454.1-201ENST00000443948 995 ntBASIC23.59■■□□□ 1.37
SCAF1Q9H7N4 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC23.59■■□□□ 1.37
SCAF1Q9H7N4 AL162385.1-201ENST00000451595 1202 ntTSL 2 BASIC23.59■■□□□ 1.37
SCAF1Q9H7N4 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC23.59■■□□□ 1.37
SCAF1Q9H7N4 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC23.59■■□□□ 1.37
SCAF1Q9H7N4 RARRES2P9-201ENST00000565168 469 ntBASIC23.59■■□□□ 1.37
SCAF1Q9H7N4 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SCAF1Q9H7N4 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SCAF1Q9H7N4 Metazoa_SRP.91-201ENST00000622745 281 ntBASIC23.59■■□□□ 1.37
SCAF1Q9H7N4 PPA1-206ENST00000625364 644 ntTSL 5 BASIC23.59■■□□□ 1.37
SCAF1Q9H7N4 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC23.59■■□□□ 1.37
SCAF1Q9H7N4 LINC02012-201ENST00000608206 1725 ntBASIC23.58■■□□□ 1.37
SCAF1Q9H7N4 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
SCAF1Q9H7N4 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SCAF1Q9H7N4 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SCAF1Q9H7N4 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
SCAF1Q9H7N4 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC23.58■■□□□ 1.37
SCAF1Q9H7N4 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SCAF1Q9H7N4 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC23.58■■□□□ 1.37
SCAF1Q9H7N4 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SCAF1Q9H7N4 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC23.58■■□□□ 1.37
SCAF1Q9H7N4 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
SCAF1Q9H7N4 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC23.58■■□□□ 1.37
SCAF1Q9H7N4 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
SCAF1Q9H7N4 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
SCAF1Q9H7N4 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
SCAF1Q9H7N4 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.36
SCAF1Q9H7N4 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC23.58■■□□□ 1.36
SCAF1Q9H7N4 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.36
SCAF1Q9H7N4 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
SCAF1Q9H7N4 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC23.58■■□□□ 1.36
SCAF1Q9H7N4 AMT-250ENST00000637682 1823 ntTSL 5 BASIC23.58■■□□□ 1.36
SCAF1Q9H7N4 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC23.58■■□□□ 1.36
SCAF1Q9H7N4 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC23.58■■□□□ 1.36
SCAF1Q9H7N4 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
SCAF1Q9H7N4 AC005534.1-201ENST00000455709 742 ntTSL 2 BASIC23.58■■□□□ 1.36
SCAF1Q9H7N4 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC23.58■■□□□ 1.36
SCAF1Q9H7N4 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
SCAF1Q9H7N4 AC020656.1-201ENST00000548900 599 ntTSL 3 BASIC23.58■■□□□ 1.36
SCAF1Q9H7N4 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC23.58■■□□□ 1.36
SCAF1Q9H7N4 MTCYBP28-201ENST00000566728 1132 ntBASIC23.58■■□□□ 1.36
SCAF1Q9H7N4 LINC01451-201ENST00000623792 534 ntBASIC23.58■■□□□ 1.36
SCAF1Q9H7N4 RFC1-217ENST00000639695 867 ntTSL 5 BASIC23.58■■□□□ 1.36
SCAF1Q9H7N4 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC23.58■■□□□ 1.36
SCAF1Q9H7N4 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.36
SCAF1Q9H7N4 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC23.58■■□□□ 1.36
SCAF1Q9H7N4 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
SCAF1Q9H7N4 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC23.57■■□□□ 1.36
SCAF1Q9H7N4 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
SCAF1Q9H7N4 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SCAF1Q9H7N4 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC23.57■■□□□ 1.36
SCAF1Q9H7N4 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
SCAF1Q9H7N4 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SCAF1Q9H7N4 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SCAF1Q9H7N4 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
SCAF1Q9H7N4 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC23.57■■□□□ 1.36
SCAF1Q9H7N4 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SCAF1Q9H7N4 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
SCAF1Q9H7N4 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
SCAF1Q9H7N4 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SCAF1Q9H7N4 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SCAF1Q9H7N4 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC23.57■■□□□ 1.36
SCAF1Q9H7N4 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC23.57■■□□□ 1.36
SCAF1Q9H7N4 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SCAF1Q9H7N4 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SCAF1Q9H7N4 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SCAF1Q9H7N4 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SCAF1Q9H7N4 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SCAF1Q9H7N4 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC23.57■■□□□ 1.36
SCAF1Q9H7N4 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
SCAF1Q9H7N4 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC23.57■■□□□ 1.36
SCAF1Q9H7N4 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC23.57■■□□□ 1.36
SCAF1Q9H7N4 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SCAF1Q9H7N4 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
SCAF1Q9H7N4 LINC00469-201ENST00000321800 708 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
SCAF1Q9H7N4 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
SCAF1Q9H7N4 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
SCAF1Q9H7N4 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
SCAF1Q9H7N4 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC23.57■■□□□ 1.36
SCAF1Q9H7N4 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC23.57■■□□□ 1.36
SCAF1Q9H7N4 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC23.57■■□□□ 1.36
SCAF1Q9H7N4 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
SCAF1Q9H7N4 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
SCAF1Q9H7N4 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms