Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC17.2■□□□□ 0.34
UBE2OQ9C0C9 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
UBE2OQ9C0C9 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.2■□□□□ 0.34
UBE2OQ9C0C9 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC17.2■□□□□ 0.34
UBE2OQ9C0C9 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17.2■□□□□ 0.34
UBE2OQ9C0C9 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBE2OQ9C0C9 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBE2OQ9C0C9 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
UBE2OQ9C0C9 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
UBE2OQ9C0C9 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
UBE2OQ9C0C9 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC17.2■□□□□ 0.34
UBE2OQ9C0C9 AC006480.2-201ENST00000609770 1337 ntBASIC17.2■□□□□ 0.34
UBE2OQ9C0C9 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBE2OQ9C0C9 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBE2OQ9C0C9 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBE2OQ9C0C9 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
UBE2OQ9C0C9 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBE2OQ9C0C9 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBE2OQ9C0C9 AGER-206ENST00000375070 1463 ntTSL 5 BASIC17.19■□□□□ 0.34
UBE2OQ9C0C9 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
UBE2OQ9C0C9 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBE2OQ9C0C9 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBE2OQ9C0C9 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
UBE2OQ9C0C9 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
UBE2OQ9C0C9 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
UBE2OQ9C0C9 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.19■□□□□ 0.34
UBE2OQ9C0C9 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
UBE2OQ9C0C9 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBE2OQ9C0C9 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.19■□□□□ 0.34
UBE2OQ9C0C9 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBE2OQ9C0C9 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.19■□□□□ 0.34
UBE2OQ9C0C9 U82695.1-201ENST00000635752 1889 ntBASIC17.19■□□□□ 0.34
UBE2OQ9C0C9 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBE2OQ9C0C9 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBE2OQ9C0C9 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBE2OQ9C0C9 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
UBE2OQ9C0C9 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
UBE2OQ9C0C9 SNX21-203ENST00000372541 771 ntTSL 2 BASIC17.19■□□□□ 0.34
UBE2OQ9C0C9 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
UBE2OQ9C0C9 AC004987.2-201ENST00000395959 1148 ntBASIC17.19■□□□□ 0.34
UBE2OQ9C0C9 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
UBE2OQ9C0C9 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.19■□□□□ 0.34
UBE2OQ9C0C9 AC016700.1-201ENST00000429424 312 ntBASIC17.19■□□□□ 0.34
UBE2OQ9C0C9 KRT18P64-201ENST00000434946 1219 ntBASIC17.19■□□□□ 0.34
UBE2OQ9C0C9 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC17.19■□□□□ 0.34
UBE2OQ9C0C9 IQSEC3P1-201ENST00000538799 536 ntBASIC17.19■□□□□ 0.34
UBE2OQ9C0C9 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC17.19■□□□□ 0.34
UBE2OQ9C0C9 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
UBE2OQ9C0C9 PRKXP1-201ENST00000561423 1122 ntBASIC17.19■□□□□ 0.34
UBE2OQ9C0C9 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC17.19■□□□□ 0.34
UBE2OQ9C0C9 DIO1-215ENST00000610607 796 ntTSL 5 BASIC17.19■□□□□ 0.34
UBE2OQ9C0C9 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBE2OQ9C0C9 AC132938.4-201ENST00000623835 848 ntBASIC17.19■□□□□ 0.34
UBE2OQ9C0C9 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC17.19■□□□□ 0.34
UBE2OQ9C0C9 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBE2OQ9C0C9 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.19■□□□□ 0.34
UBE2OQ9C0C9 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBE2OQ9C0C9 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBE2OQ9C0C9 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
UBE2OQ9C0C9 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBE2OQ9C0C9 RNF216P1-203ENST00000404404 2427 ntBASIC17.19■□□□□ 0.34
UBE2OQ9C0C9 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBE2OQ9C0C9 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBE2OQ9C0C9 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBE2OQ9C0C9 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBE2OQ9C0C9 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
UBE2OQ9C0C9 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
UBE2OQ9C0C9 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
UBE2OQ9C0C9 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
UBE2OQ9C0C9 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
UBE2OQ9C0C9 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
UBE2OQ9C0C9 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
UBE2OQ9C0C9 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.18■□□□□ 0.34
UBE2OQ9C0C9 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
UBE2OQ9C0C9 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.18■□□□□ 0.34
UBE2OQ9C0C9 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
UBE2OQ9C0C9 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
UBE2OQ9C0C9 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
UBE2OQ9C0C9 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
UBE2OQ9C0C9 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.18■□□□□ 0.34
UBE2OQ9C0C9 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC17.18■□□□□ 0.34
UBE2OQ9C0C9 AC069218.1-201ENST00000435269 762 ntBASIC17.18■□□□□ 0.34
UBE2OQ9C0C9 USP40-206ENST00000443711 628 ntTSL 2 BASIC17.18■□□□□ 0.34
UBE2OQ9C0C9 AC104784.1-201ENST00000473096 294 ntBASIC17.18■□□□□ 0.34
UBE2OQ9C0C9 SUPT4H1P2-201ENST00000501248 353 ntBASIC17.18■□□□□ 0.34
UBE2OQ9C0C9 AP001582.1-201ENST00000525856 295 ntBASIC17.18■□□□□ 0.34
UBE2OQ9C0C9 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
UBE2OQ9C0C9 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC17.18■□□□□ 0.34
UBE2OQ9C0C9 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.18■□□□□ 0.34
UBE2OQ9C0C9 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC17.18■□□□□ 0.34
UBE2OQ9C0C9 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
UBE2OQ9C0C9 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
UBE2OQ9C0C9 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
UBE2OQ9C0C9 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
UBE2OQ9C0C9 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
UBE2OQ9C0C9 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.18■□□□□ 0.34
UBE2OQ9C0C9 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
UBE2OQ9C0C9 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
UBE2OQ9C0C9 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.18■□□□□ 0.34
UBE2OQ9C0C9 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms