Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.19■□□□□ 0.18
FOXP3Q9BZS1 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.19■□□□□ 0.18
FOXP3Q9BZS1 AC051619.7-201ENST00000568314 623 ntBASIC16.19■□□□□ 0.18
FOXP3Q9BZS1 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.19■□□□□ 0.18
FOXP3Q9BZS1 AP001059.3-201ENST00000619053 235 ntBASIC16.19■□□□□ 0.18
FOXP3Q9BZS1 AJ011932.1-201ENST00000621707 465 ntBASIC16.19■□□□□ 0.18
FOXP3Q9BZS1 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.19■□□□□ 0.18
FOXP3Q9BZS1 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.19■□□□□ 0.18
FOXP3Q9BZS1 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
FOXP3Q9BZS1 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.19■□□□□ 0.18
FOXP3Q9BZS1 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.19■□□□□ 0.18
FOXP3Q9BZS1 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXP3Q9BZS1 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC16.19■□□□□ 0.18
FOXP3Q9BZS1 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
FOXP3Q9BZS1 PCDHA3-202ENST00000532566 4594 ntBASIC16.19■□□□□ 0.18
FOXP3Q9BZS1 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXP3Q9BZS1 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXP3Q9BZS1 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXP3Q9BZS1 AC232323.1-201ENST00000540724 2099 ntBASIC16.18■□□□□ 0.18
FOXP3Q9BZS1 REXO1L5P-201ENST00000622260 2098 ntBASIC16.18■□□□□ 0.18
FOXP3Q9BZS1 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.18■□□□□ 0.18
FOXP3Q9BZS1 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC16.18■□□□□ 0.18
FOXP3Q9BZS1 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FOXP3Q9BZS1 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
FOXP3Q9BZS1 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
FOXP3Q9BZS1 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FOXP3Q9BZS1 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
FOXP3Q9BZS1 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
FOXP3Q9BZS1 FGD5P1-202ENST00000614866 2498 ntBASIC16.18■□□□□ 0.18
FOXP3Q9BZS1 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.18■□□□□ 0.18
FOXP3Q9BZS1 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
FOXP3Q9BZS1 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FOXP3Q9BZS1 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
FOXP3Q9BZS1 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FOXP3Q9BZS1 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
FOXP3Q9BZS1 RPL5P21-201ENST00000404620 815 ntBASIC16.18■□□□□ 0.18
FOXP3Q9BZS1 AC055876.3-201ENST00000431496 288 ntBASIC16.18■□□□□ 0.18
FOXP3Q9BZS1 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.18■□□□□ 0.18
FOXP3Q9BZS1 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC16.18■□□□□ 0.18
FOXP3Q9BZS1 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.18■□□□□ 0.18
FOXP3Q9BZS1 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.18■□□□□ 0.18
FOXP3Q9BZS1 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
FOXP3Q9BZS1 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.18■□□□□ 0.18
FOXP3Q9BZS1 AC138649.4-201ENST00000612222 287 ntBASIC16.18■□□□□ 0.18
FOXP3Q9BZS1 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.18■□□□□ 0.18
FOXP3Q9BZS1 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
FOXP3Q9BZS1 AMT-204ENST00000427987 1646 ntTSL 5 BASIC16.18■□□□□ 0.18
FOXP3Q9BZS1 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
FOXP3Q9BZS1 AC023024.2-201ENST00000623561 1993 ntBASIC16.18■□□□□ 0.18
FOXP3Q9BZS1 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.18■□□□□ 0.18
FOXP3Q9BZS1 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
FOXP3Q9BZS1 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
FOXP3Q9BZS1 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FOXP3Q9BZS1 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FOXP3Q9BZS1 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
FOXP3Q9BZS1 AC005089.1-201ENST00000619486 2241 ntBASIC16.18■□□□□ 0.18
FOXP3Q9BZS1 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
FOXP3Q9BZS1 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC16.18■□□□□ 0.18
FOXP3Q9BZS1 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.18■□□□□ 0.18
FOXP3Q9BZS1 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FOXP3Q9BZS1 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
FOXP3Q9BZS1 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FOXP3Q9BZS1 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXP3Q9BZS1 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.17■□□□□ 0.18
FOXP3Q9BZS1 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXP3Q9BZS1 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC16.17■□□□□ 0.18
FOXP3Q9BZS1 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC16.17■□□□□ 0.18
FOXP3Q9BZS1 AC106881.1-201ENST00000605849 3329 ntBASIC16.17■□□□□ 0.18
FOXP3Q9BZS1 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXP3Q9BZS1 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXP3Q9BZS1 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
FOXP3Q9BZS1 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
FOXP3Q9BZS1 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXP3Q9BZS1 AP002414.2-201ENST00000591780 3365 ntBASIC16.17■□□□□ 0.18
FOXP3Q9BZS1 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXP3Q9BZS1 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.17■□□□□ 0.18
FOXP3Q9BZS1 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXP3Q9BZS1 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
FOXP3Q9BZS1 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.17■□□□□ 0.18
FOXP3Q9BZS1 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.17■□□□□ 0.18
FOXP3Q9BZS1 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXP3Q9BZS1 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.17■□□□□ 0.18
FOXP3Q9BZS1 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC16.17■□□□□ 0.18
FOXP3Q9BZS1 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXP3Q9BZS1 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXP3Q9BZS1 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.17■□□□□ 0.18
FOXP3Q9BZS1 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
FOXP3Q9BZS1 AC107890.1-201ENST00000422478 521 ntBASIC16.17■□□□□ 0.18
FOXP3Q9BZS1 BASP1P1-201ENST00000430708 665 ntBASIC16.17■□□□□ 0.18
FOXP3Q9BZS1 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.17■□□□□ 0.18
FOXP3Q9BZS1 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
FOXP3Q9BZS1 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.17■□□□□ 0.18
FOXP3Q9BZS1 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.17■□□□□ 0.18
FOXP3Q9BZS1 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.17■□□□□ 0.18
FOXP3Q9BZS1 AL512356.2-201ENST00000546955 174 ntBASIC16.17■□□□□ 0.18
FOXP3Q9BZS1 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.17■□□□□ 0.18
FOXP3Q9BZS1 LINC01225-203ENST00000563550 1244 ntBASIC16.17■□□□□ 0.18
FOXP3Q9BZS1 AC026150.2-201ENST00000564693 1156 ntBASIC16.17■□□□□ 0.18
FOXP3Q9BZS1 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.17■□□□□ 0.18
FOXP3Q9BZS1 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms