Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.13□□□□□ -0.15
USB1Q9BQ65 AC009477.1-201ENST00000452936 217 ntBASIC14.13□□□□□ -0.15
USB1Q9BQ65 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.13□□□□□ -0.15
USB1Q9BQ65 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.13□□□□□ -0.15
USB1Q9BQ65 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.13□□□□□ -0.15
USB1Q9BQ65 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.13□□□□□ -0.15
USB1Q9BQ65 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.13□□□□□ -0.15
USB1Q9BQ65 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC14.13□□□□□ -0.15
USB1Q9BQ65 BANF1P1-201ENST00000553684 263 ntBASIC14.13□□□□□ -0.15
USB1Q9BQ65 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.13□□□□□ -0.15
USB1Q9BQ65 AC138761.1-201ENST00000584393 385 ntBASIC14.13□□□□□ -0.15
USB1Q9BQ65 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
USB1Q9BQ65 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.13□□□□□ -0.15
USB1Q9BQ65 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
USB1Q9BQ65 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
USB1Q9BQ65 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
USB1Q9BQ65 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
USB1Q9BQ65 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
USB1Q9BQ65 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
USB1Q9BQ65 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
USB1Q9BQ65 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.13□□□□□ -0.15
USB1Q9BQ65 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
USB1Q9BQ65 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
USB1Q9BQ65 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
USB1Q9BQ65 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
USB1Q9BQ65 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.13□□□□□ -0.15
USB1Q9BQ65 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
USB1Q9BQ65 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
USB1Q9BQ65 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC14.13□□□□□ -0.15
USB1Q9BQ65 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
USB1Q9BQ65 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
USB1Q9BQ65 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.12□□□□□ -0.15
USB1Q9BQ65 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
USB1Q9BQ65 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.12□□□□□ -0.15
USB1Q9BQ65 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
USB1Q9BQ65 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
USB1Q9BQ65 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
USB1Q9BQ65 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.12□□□□□ -0.15
USB1Q9BQ65 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
USB1Q9BQ65 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
USB1Q9BQ65 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
USB1Q9BQ65 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
USB1Q9BQ65 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
USB1Q9BQ65 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
USB1Q9BQ65 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
USB1Q9BQ65 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
USB1Q9BQ65 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
USB1Q9BQ65 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
USB1Q9BQ65 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.12□□□□□ -0.15
USB1Q9BQ65 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
USB1Q9BQ65 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
USB1Q9BQ65 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
USB1Q9BQ65 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
USB1Q9BQ65 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.12□□□□□ -0.15
USB1Q9BQ65 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
USB1Q9BQ65 AC004987.2-201ENST00000395959 1148 ntBASIC14.12□□□□□ -0.15
USB1Q9BQ65 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
USB1Q9BQ65 SMIM11A-201ENST00000399292 850 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
USB1Q9BQ65 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.12□□□□□ -0.15
USB1Q9BQ65 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.12□□□□□ -0.15
USB1Q9BQ65 AL080243.2-201ENST00000418783 582 ntBASIC14.12□□□□□ -0.15
USB1Q9BQ65 AC002472.2-201ENST00000442739 958 ntBASIC14.12□□□□□ -0.15
USB1Q9BQ65 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.12□□□□□ -0.15
USB1Q9BQ65 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.12□□□□□ -0.15
USB1Q9BQ65 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.12□□□□□ -0.15
USB1Q9BQ65 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
USB1Q9BQ65 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
USB1Q9BQ65 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.12□□□□□ -0.15
USB1Q9BQ65 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
USB1Q9BQ65 SDHAP3-202ENST00000515467 728 ntBASIC14.12□□□□□ -0.15
USB1Q9BQ65 AC243562.2-201ENST00000561247 970 ntBASIC14.12□□□□□ -0.15
USB1Q9BQ65 LINC02560-201ENST00000596379 459 ntBASIC14.12□□□□□ -0.15
USB1Q9BQ65 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.12□□□□□ -0.15
USB1Q9BQ65 MAP3K14-205ENST00000617331 1049 ntTSL 5 BASIC14.12□□□□□ -0.15
USB1Q9BQ65 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
USB1Q9BQ65 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
USB1Q9BQ65 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
USB1Q9BQ65 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
USB1Q9BQ65 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
USB1Q9BQ65 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
USB1Q9BQ65 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.12□□□□□ -0.15
USB1Q9BQ65 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
USB1Q9BQ65 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
USB1Q9BQ65 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
USB1Q9BQ65 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
USB1Q9BQ65 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
USB1Q9BQ65 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
USB1Q9BQ65 AL359183.1-201ENST00000623796 2132 ntBASIC14.12□□□□□ -0.15
USB1Q9BQ65 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
USB1Q9BQ65 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.12□□□□□ -0.15
USB1Q9BQ65 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
USB1Q9BQ65 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
USB1Q9BQ65 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
USB1Q9BQ65 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
USB1Q9BQ65 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
USB1Q9BQ65 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
USB1Q9BQ65 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.11□□□□□ -0.15
USB1Q9BQ65 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
USB1Q9BQ65 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
USB1Q9BQ65 AC126177.1-201ENST00000547829 2218 ntBASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms