Protein–RNA interactions for Protein: Q99731

CCL19, C-C motif chemokine 19, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL19Q99731 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC13.11□□□□□ -0.31
CCL19Q99731 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CCL19Q99731 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.11□□□□□ -0.31
CCL19Q99731 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
CCL19Q99731 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC13.11□□□□□ -0.31
CCL19Q99731 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CCL19Q99731 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL19Q99731 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL19Q99731 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CCL19Q99731 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL19Q99731 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL19Q99731 NDUFAB1P1-201ENST00000404262 460 ntBASIC13.11□□□□□ -0.31
CCL19Q99731 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC13.11□□□□□ -0.31
CCL19Q99731 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.11□□□□□ -0.31
CCL19Q99731 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC13.11□□□□□ -0.31
CCL19Q99731 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC13.11□□□□□ -0.31
CCL19Q99731 EHF-205ENST00000527935 557 ntTSL 2 BASIC13.11□□□□□ -0.31
CCL19Q99731 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
CCL19Q99731 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC13.11□□□□□ -0.31
CCL19Q99731 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC13.11□□□□□ -0.31
CCL19Q99731 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC13.11□□□□□ -0.31
CCL19Q99731 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.11□□□□□ -0.31
CCL19Q99731 KC6-205ENST00000599934 556 ntTSL 4 BASIC13.11□□□□□ -0.31
CCL19Q99731 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CCL19Q99731 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC13.11□□□□□ -0.31
CCL19Q99731 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC13.11□□□□□ -0.31
CCL19Q99731 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
CCL19Q99731 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
CCL19Q99731 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL19Q99731 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL19Q99731 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC13.11□□□□□ -0.31
CCL19Q99731 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CCL19Q99731 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.11□□□□□ -0.31
CCL19Q99731 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CCL19Q99731 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC13.11□□□□□ -0.31
CCL19Q99731 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC13.11□□□□□ -0.31
CCL19Q99731 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL19Q99731 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CCL19Q99731 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
CCL19Q99731 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC13.11□□□□□ -0.31
CCL19Q99731 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC13.11□□□□□ -0.31
CCL19Q99731 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL19Q99731 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CCL19Q99731 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL19Q99731 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL19Q99731 FLII-221ENST00000578558 2377 ntTSL 5 BASIC13.1□□□□□ -0.31
CCL19Q99731 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
CCL19Q99731 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL19Q99731 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC13.1□□□□□ -0.31
CCL19Q99731 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
CCL19Q99731 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL19Q99731 AMT-233ENST00000636522 1620 ntTSL 2 BASIC13.1□□□□□ -0.31
CCL19Q99731 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CCL19Q99731 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CCL19Q99731 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL19Q99731 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.1□□□□□ -0.31
CCL19Q99731 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CCL19Q99731 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL19Q99731 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
CCL19Q99731 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC13.1□□□□□ -0.31
CCL19Q99731 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CCL19Q99731 CSH2-202ENST00000345366 598 ntTSL 5 BASIC13.1□□□□□ -0.31
CCL19Q99731 ELK2AP-201ENST00000392510 1007 ntBASIC13.1□□□□□ -0.31
CCL19Q99731 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC13.1□□□□□ -0.31
CCL19Q99731 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC13.1□□□□□ -0.31
CCL19Q99731 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC13.1□□□□□ -0.31
CCL19Q99731 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.1□□□□□ -0.31
CCL19Q99731 FNTAP2-201ENST00000430308 634 ntBASIC13.1□□□□□ -0.31
CCL19Q99731 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC13.1□□□□□ -0.31
CCL19Q99731 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC13.1□□□□□ -0.31
CCL19Q99731 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC13.1□□□□□ -0.31
CCL19Q99731 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.1□□□□□ -0.31
CCL19Q99731 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.1□□□□□ -0.31
CCL19Q99731 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
CCL19Q99731 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
CCL19Q99731 COG4-212ENST00000564653 590 ntTSL 5 BASIC13.1□□□□□ -0.31
CCL19Q99731 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC13.1□□□□□ -0.31
CCL19Q99731 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC13.1□□□□□ -0.31
CCL19Q99731 RN7SL190P-201ENST00000582519 257 ntBASIC13.1□□□□□ -0.31
CCL19Q99731 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC13.1□□□□□ -0.31
CCL19Q99731 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC13.1□□□□□ -0.31
CCL19Q99731 DIO1-215ENST00000610607 796 ntTSL 5 BASIC13.1□□□□□ -0.31
CCL19Q99731 AL096828.3-201ENST00000615354 462 ntBASIC13.1□□□□□ -0.31
CCL19Q99731 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL19Q99731 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL19Q99731 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.1□□□□□ -0.31
CCL19Q99731 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL19Q99731 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL19Q99731 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CCL19Q99731 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL19Q99731 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL19Q99731 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL19Q99731 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL19Q99731 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CCL19Q99731 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL19Q99731 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCL19Q99731 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCL19Q99731 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCL19Q99731 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC13.09□□□□□ -0.31
CCL19Q99731 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms