Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.23■□□□□ 0.03
PKP4Q99569 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC15.23■□□□□ 0.03
PKP4Q99569 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.23■□□□□ 0.03
PKP4Q99569 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.23■□□□□ 0.03
PKP4Q99569 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.23■□□□□ 0.03
PKP4Q99569 AC104794.3-201ENST00000566840 1248 ntBASIC15.23■□□□□ 0.03
PKP4Q99569 AC004790.1-201ENST00000612686 536 ntBASIC15.23■□□□□ 0.03
PKP4Q99569 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
PKP4Q99569 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
PKP4Q99569 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
PKP4Q99569 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PKP4Q99569 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.23■□□□□ 0.03
PKP4Q99569 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PKP4Q99569 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PKP4Q99569 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PKP4Q99569 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PKP4Q99569 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PKP4Q99569 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PKP4Q99569 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.22■□□□□ 0.03
PKP4Q99569 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
PKP4Q99569 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PKP4Q99569 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.22■□□□□ 0.03
PKP4Q99569 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.22■□□□□ 0.03
PKP4Q99569 AC112693.3-201ENST00000624819 1983 ntBASIC15.22■□□□□ 0.03
PKP4Q99569 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PKP4Q99569 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PKP4Q99569 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
PKP4Q99569 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PKP4Q99569 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
PKP4Q99569 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.22■□□□□ 0.03
PKP4Q99569 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PKP4Q99569 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PKP4Q99569 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PKP4Q99569 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PKP4Q99569 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PKP4Q99569 RAC2-204ENST00000406508 893 ntTSL 5 BASIC15.22■□□□□ 0.03
PKP4Q99569 TMPRSS11CP-201ENST00000453277 683 ntBASIC15.22■□□□□ 0.03
PKP4Q99569 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.22■□□□□ 0.03
PKP4Q99569 AC015910.1-201ENST00000579400 975 ntBASIC15.22■□□□□ 0.03
PKP4Q99569 AL355385.1-201ENST00000606123 409 ntBASIC15.22■□□□□ 0.03
PKP4Q99569 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.22■□□□□ 0.03
PKP4Q99569 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.22■□□□□ 0.03
PKP4Q99569 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.22■□□□□ 0.03
PKP4Q99569 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.22■□□□□ 0.03
PKP4Q99569 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.22■□□□□ 0.03
PKP4Q99569 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.22■□□□□ 0.03
PKP4Q99569 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PKP4Q99569 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
PKP4Q99569 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.22■□□□□ 0.03
PKP4Q99569 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.22■□□□□ 0.03
PKP4Q99569 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.22■□□□□ 0.03
PKP4Q99569 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.22■□□□□ 0.03
PKP4Q99569 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.22■□□□□ 0.03
PKP4Q99569 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PKP4Q99569 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PKP4Q99569 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
PKP4Q99569 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
PKP4Q99569 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
PKP4Q99569 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PKP4Q99569 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.22■□□□□ 0.03
PKP4Q99569 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PKP4Q99569 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
PKP4Q99569 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
PKP4Q99569 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.22■□□□□ 0.03
PKP4Q99569 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
PKP4Q99569 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PKP4Q99569 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PKP4Q99569 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PKP4Q99569 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PKP4Q99569 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PKP4Q99569 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PKP4Q99569 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
PKP4Q99569 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PKP4Q99569 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PKP4Q99569 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
PKP4Q99569 AC126177.1-201ENST00000547829 2218 ntBASIC15.21■□□□□ 0.03
PKP4Q99569 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.21■□□□□ 0.03
PKP4Q99569 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
PKP4Q99569 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.21■□□□□ 0.03
PKP4Q99569 AC138969.3-201ENST00000546612 1459 ntBASIC15.21■□□□□ 0.03
PKP4Q99569 AC138932.2-201ENST00000548268 1459 ntBASIC15.21■□□□□ 0.03
PKP4Q99569 AC126755.4-201ENST00000549796 1459 ntBASIC15.21■□□□□ 0.03
PKP4Q99569 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PKP4Q99569 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.21■□□□□ 0.03
PKP4Q99569 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
PKP4Q99569 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PKP4Q99569 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
PKP4Q99569 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PKP4Q99569 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PKP4Q99569 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PKP4Q99569 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
PKP4Q99569 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PKP4Q99569 AC084364.1-201ENST00000551967 1556 ntBASIC15.21■□□□□ 0.03
PKP4Q99569 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PKP4Q99569 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PKP4Q99569 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PKP4Q99569 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PKP4Q99569 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PKP4Q99569 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PKP4Q99569 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms