Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC13.05□□□□□ -0.32
CSMD1Q96PZ7 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CSMD1Q96PZ7 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CSMD1Q96PZ7 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC13.05□□□□□ -0.32
CSMD1Q96PZ7 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CSMD1Q96PZ7 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CSMD1Q96PZ7 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC13.05□□□□□ -0.32
CSMD1Q96PZ7 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC13.05□□□□□ -0.32
CSMD1Q96PZ7 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC13.05□□□□□ -0.32
CSMD1Q96PZ7 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC13.05□□□□□ -0.32
CSMD1Q96PZ7 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC13.05□□□□□ -0.32
CSMD1Q96PZ7 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC13.05□□□□□ -0.32
CSMD1Q96PZ7 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CSMD1Q96PZ7 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
CSMD1Q96PZ7 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CSMD1Q96PZ7 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CSMD1Q96PZ7 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CSMD1Q96PZ7 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.05□□□□□ -0.32
CSMD1Q96PZ7 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC13.05□□□□□ -0.32
CSMD1Q96PZ7 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CSMD1Q96PZ7 AMT-233ENST00000636522 1620 ntTSL 2 BASIC13.05□□□□□ -0.32
CSMD1Q96PZ7 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CSMD1Q96PZ7 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC13.05□□□□□ -0.32
CSMD1Q96PZ7 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC13.05□□□□□ -0.32
CSMD1Q96PZ7 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
CSMD1Q96PZ7 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CSMD1Q96PZ7 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC13.05□□□□□ -0.32
CSMD1Q96PZ7 KLF2P2-201ENST00000416807 1039 ntBASIC13.05□□□□□ -0.32
CSMD1Q96PZ7 AC005740.2-201ENST00000511085 419 ntBASIC13.05□□□□□ -0.32
CSMD1Q96PZ7 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC13.05□□□□□ -0.32
CSMD1Q96PZ7 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC13.05□□□□□ -0.32
CSMD1Q96PZ7 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.05□□□□□ -0.32
CSMD1Q96PZ7 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CSMD1Q96PZ7 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CSMD1Q96PZ7 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CSMD1Q96PZ7 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC13.05□□□□□ -0.32
CSMD1Q96PZ7 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CSMD1Q96PZ7 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CSMD1Q96PZ7 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CSMD1Q96PZ7 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CSMD1Q96PZ7 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC13.05□□□□□ -0.32
CSMD1Q96PZ7 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CSMD1Q96PZ7 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
CSMD1Q96PZ7 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC13.05□□□□□ -0.32
CSMD1Q96PZ7 REEP5-205ENST00000504247 480 ntTSL 5 BASIC13.05□□□□□ -0.32
CSMD1Q96PZ7 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC13.05□□□□□ -0.32
CSMD1Q96PZ7 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CSMD1Q96PZ7 EID1-202ENST00000560490 584 ntTSL 3 BASIC13.05□□□□□ -0.32
CSMD1Q96PZ7 AC020922.3-201ENST00000595064 547 ntBASIC13.05□□□□□ -0.32
CSMD1Q96PZ7 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC13.05□□□□□ -0.32
CSMD1Q96PZ7 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
CSMD1Q96PZ7 DDX5-235ENST00000630471 473 ntTSL 4 BASIC13.05□□□□□ -0.32
CSMD1Q96PZ7 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CSMD1Q96PZ7 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
CSMD1Q96PZ7 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CSMD1Q96PZ7 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CSMD1Q96PZ7 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.04□□□□□ -0.32
CSMD1Q96PZ7 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CSMD1Q96PZ7 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC13.04□□□□□ -0.32
CSMD1Q96PZ7 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
CSMD1Q96PZ7 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CSMD1Q96PZ7 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
CSMD1Q96PZ7 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
CSMD1Q96PZ7 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
CSMD1Q96PZ7 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC13.04□□□□□ -0.32
CSMD1Q96PZ7 TMCO5B-205ENST00000530020 894 ntBASIC13.04□□□□□ -0.32
CSMD1Q96PZ7 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CSMD1Q96PZ7 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.04□□□□□ -0.32
CSMD1Q96PZ7 AC242376.2-201ENST00000619355 883 ntBASIC13.04□□□□□ -0.32
CSMD1Q96PZ7 AC006453.1-201ENST00000636037 1257 ntBASIC13.04□□□□□ -0.32
CSMD1Q96PZ7 AL592295.3-201ENST00000637155 863 ntTSL 5 BASIC13.04□□□□□ -0.32
CSMD1Q96PZ7 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
CSMD1Q96PZ7 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CSMD1Q96PZ7 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CSMD1Q96PZ7 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC13.04□□□□□ -0.32
CSMD1Q96PZ7 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC13.04□□□□□ -0.32
CSMD1Q96PZ7 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC13.04□□□□□ -0.32
CSMD1Q96PZ7 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.04□□□□□ -0.32
CSMD1Q96PZ7 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CSMD1Q96PZ7 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CSMD1Q96PZ7 AGK-211ENST00000629555 2765 ntTSL 5 BASIC13.04□□□□□ -0.32
CSMD1Q96PZ7 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CSMD1Q96PZ7 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC13.04□□□□□ -0.32
CSMD1Q96PZ7 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CSMD1Q96PZ7 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CSMD1Q96PZ7 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.04□□□□□ -0.32
CSMD1Q96PZ7 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CSMD1Q96PZ7 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
CSMD1Q96PZ7 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CSMD1Q96PZ7 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CSMD1Q96PZ7 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC13.04□□□□□ -0.32
CSMD1Q96PZ7 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC13.04□□□□□ -0.32
CSMD1Q96PZ7 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC13.04□□□□□ -0.32
CSMD1Q96PZ7 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC13.04□□□□□ -0.32
CSMD1Q96PZ7 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC13.04□□□□□ -0.32
CSMD1Q96PZ7 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
CSMD1Q96PZ7 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CSMD1Q96PZ7 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC13.04□□□□□ -0.32
CSMD1Q96PZ7 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CSMD1Q96PZ7 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms