Protein–RNA interactions for Protein: Q96LM1

LINC00615, Putative uncharacterized protein encoded by LINC00615, humanhuman

Predicted RBP Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00615Q96LM1 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00615Q96LM1 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.12■□□□□ 0.01
LINC00615Q96LM1 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
LINC00615Q96LM1 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00615Q96LM1 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00615Q96LM1 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00615Q96LM1 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC15.12■□□□□ 0.01
LINC00615Q96LM1 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00615Q96LM1 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
LINC00615Q96LM1 AC132872.4-202ENST00000622924 2756 ntBASIC15.12■□□□□ 0.01
LINC00615Q96LM1 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00615Q96LM1 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00615Q96LM1 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00615Q96LM1 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00615Q96LM1 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00615Q96LM1 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00615Q96LM1 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00615Q96LM1 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.12■□□□□ 0.01
LINC00615Q96LM1 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
LINC00615Q96LM1 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.12■□□□□ 0.01
LINC00615Q96LM1 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
LINC00615Q96LM1 ACTG1P3-201ENST00000431775 1114 ntBASIC15.12■□□□□ 0.01
LINC00615Q96LM1 PNKD-204ENST00000436005 978 ntTSL 5 BASIC15.12■□□□□ 0.01
LINC00615Q96LM1 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC15.12■□□□□ 0.01
LINC00615Q96LM1 RN7SL837P-201ENST00000463010 287 ntBASIC15.12■□□□□ 0.01
LINC00615Q96LM1 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
LINC00615Q96LM1 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00615Q96LM1 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
LINC00615Q96LM1 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
LINC00615Q96LM1 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
LINC00615Q96LM1 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.12■□□□□ 0.01
LINC00615Q96LM1 AP001063.1-201ENST00000568332 529 ntBASIC15.12■□□□□ 0.01
LINC00615Q96LM1 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.12■□□□□ 0.01
LINC00615Q96LM1 RPSAP52-203ENST00000622976 1023 ntBASIC15.12■□□□□ 0.01
LINC00615Q96LM1 BX539320.1-201ENST00000623759 877 ntBASIC15.12■□□□□ 0.01
LINC00615Q96LM1 AC005252.2-201ENST00000624630 1141 ntBASIC15.12■□□□□ 0.01
LINC00615Q96LM1 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.12■□□□□ 0.01
LINC00615Q96LM1 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00615Q96LM1 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.12■□□□□ 0.01
LINC00615Q96LM1 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.12■□□□□ 0.01
LINC00615Q96LM1 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00615Q96LM1 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00615Q96LM1 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00615Q96LM1 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00615Q96LM1 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00615Q96LM1 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00615Q96LM1 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
LINC00615Q96LM1 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00615Q96LM1 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
LINC00615Q96LM1 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00615Q96LM1 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00615Q96LM1 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.11■□□□□ 0.01
LINC00615Q96LM1 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00615Q96LM1 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00615Q96LM1 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00615Q96LM1 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00615Q96LM1 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.11■□□□□ 0.01
LINC00615Q96LM1 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00615Q96LM1 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00615Q96LM1 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00615Q96LM1 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.11■□□□□ 0.01
LINC00615Q96LM1 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
LINC00615Q96LM1 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.11■□□□□ 0.01
LINC00615Q96LM1 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00615Q96LM1 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00615Q96LM1 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00615Q96LM1 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00615Q96LM1 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.11■□□□□ 0.01
LINC00615Q96LM1 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
LINC00615Q96LM1 AL512384.1-201ENST00000406683 331 ntBASIC15.11■□□□□ 0.01
LINC00615Q96LM1 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC15.11■□□□□ 0.01
LINC00615Q96LM1 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.11■□□□□ 0.01
LINC00615Q96LM1 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC15.11■□□□□ 0.01
LINC00615Q96LM1 GAPDHP21-201ENST00000450301 1010 ntBASIC15.11■□□□□ 0.01
LINC00615Q96LM1 INE1-201ENST00000456273 945 ntBASIC15.11■□□□□ 0.01
LINC00615Q96LM1 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
LINC00615Q96LM1 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.11■□□□□ 0.01
LINC00615Q96LM1 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.11■□□□□ 0.01
LINC00615Q96LM1 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.11■□□□□ 0.01
LINC00615Q96LM1 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC15.11■□□□□ 0.01
LINC00615Q96LM1 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.11■□□□□ 0.01
LINC00615Q96LM1 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00615Q96LM1 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00615Q96LM1 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.11■□□□□ 0.01
LINC00615Q96LM1 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.11■□□□□ 0.01
LINC00615Q96LM1 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.11■□□□□ 0.01
LINC00615Q96LM1 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00615Q96LM1 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00615Q96LM1 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00615Q96LM1 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
LINC00615Q96LM1 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00615Q96LM1 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00615Q96LM1 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
LINC00615Q96LM1 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00615Q96LM1 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
LINC00615Q96LM1 CICP11-201ENST00000434745 2827 ntBASIC15.11■□□□□ 0.01
LINC00615Q96LM1 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00615Q96LM1 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00615Q96LM1 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.1■□□□□ 0.01
LINC00615Q96LM1 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms