Protein–RNA interactions for Protein: Q96L08

SUSD3, Sushi domain-containing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3Q96L08 AL139094.1-201ENST00000405549 1188 ntBASIC16.41■□□□□ 0.22
SUSD3Q96L08 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
SUSD3Q96L08 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC16.41■□□□□ 0.22
SUSD3Q96L08 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SUSD3Q96L08 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC16.41■□□□□ 0.22
SUSD3Q96L08 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC16.41■□□□□ 0.22
SUSD3Q96L08 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC16.41■□□□□ 0.22
SUSD3Q96L08 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
SUSD3Q96L08 SAMD11P1-201ENST00000571429 661 ntBASIC16.41■□□□□ 0.22
SUSD3Q96L08 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC16.41■□□□□ 0.22
SUSD3Q96L08 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SUSD3Q96L08 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC16.41■□□□□ 0.22
SUSD3Q96L08 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC16.41■□□□□ 0.22
SUSD3Q96L08 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SUSD3Q96L08 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
SUSD3Q96L08 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SUSD3Q96L08 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SUSD3Q96L08 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SUSD3Q96L08 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC16.41■□□□□ 0.22
SUSD3Q96L08 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SUSD3Q96L08 AL158070.2-201ENST00000623713 1621 ntBASIC16.41■□□□□ 0.22
SUSD3Q96L08 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SUSD3Q96L08 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SUSD3Q96L08 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.41■□□□□ 0.22
SUSD3Q96L08 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SUSD3Q96L08 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SUSD3Q96L08 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SUSD3Q96L08 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
SUSD3Q96L08 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SUSD3Q96L08 REXO1L6P-201ENST00000603433 1515 ntBASIC16.4■□□□□ 0.22
SUSD3Q96L08 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC16.4■□□□□ 0.22
SUSD3Q96L08 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SUSD3Q96L08 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SUSD3Q96L08 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SUSD3Q96L08 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SUSD3Q96L08 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SUSD3Q96L08 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SUSD3Q96L08 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC16.4■□□□□ 0.22
SUSD3Q96L08 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SUSD3Q96L08 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SUSD3Q96L08 AC006001.1-201ENST00000325130 474 ntBASIC16.4■□□□□ 0.22
SUSD3Q96L08 RPF1-202ENST00000370656 724 ntTSL 2 BASIC16.4■□□□□ 0.22
SUSD3Q96L08 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SUSD3Q96L08 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SUSD3Q96L08 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SUSD3Q96L08 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SUSD3Q96L08 FAM21FP-201ENST00000426241 1131 ntBASIC16.4■□□□□ 0.22
SUSD3Q96L08 FAM197Y7-201ENST00000432892 766 ntBASIC16.4■□□□□ 0.22
SUSD3Q96L08 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC16.4■□□□□ 0.22
SUSD3Q96L08 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC16.4■□□□□ 0.22
SUSD3Q96L08 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC16.4■□□□□ 0.22
SUSD3Q96L08 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SUSD3Q96L08 TECR-220ENST00000600083 1204 ntTSL 2 BASIC16.4■□□□□ 0.22
SUSD3Q96L08 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC16.4■□□□□ 0.22
SUSD3Q96L08 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.4■□□□□ 0.22
SUSD3Q96L08 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC16.4■□□□□ 0.22
SUSD3Q96L08 AC008687.7-202ENST00000637404 953 ntBASIC16.4■□□□□ 0.22
SUSD3Q96L08 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SUSD3Q96L08 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SUSD3Q96L08 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SUSD3Q96L08 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SUSD3Q96L08 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.4■□□□□ 0.22
SUSD3Q96L08 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SUSD3Q96L08 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SUSD3Q96L08 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
SUSD3Q96L08 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.4■□□□□ 0.22
SUSD3Q96L08 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SUSD3Q96L08 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC16.4■□□□□ 0.22
SUSD3Q96L08 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SUSD3Q96L08 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SUSD3Q96L08 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.4■□□□□ 0.22
SUSD3Q96L08 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SUSD3Q96L08 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SUSD3Q96L08 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.22
SUSD3Q96L08 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
SUSD3Q96L08 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.22
SUSD3Q96L08 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SUSD3Q96L08 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC16.39■□□□□ 0.21
SUSD3Q96L08 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SUSD3Q96L08 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SUSD3Q96L08 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SUSD3Q96L08 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SUSD3Q96L08 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.39■□□□□ 0.21
SUSD3Q96L08 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SUSD3Q96L08 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SUSD3Q96L08 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SUSD3Q96L08 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC16.39■□□□□ 0.21
SUSD3Q96L08 FOS-202ENST00000535987 1402 ntTSL 2 BASIC16.39■□□□□ 0.21
SUSD3Q96L08 TNRC18P3-201ENST00000441896 2691 ntBASIC16.39■□□□□ 0.21
SUSD3Q96L08 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SUSD3Q96L08 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.39■□□□□ 0.21
SUSD3Q96L08 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SUSD3Q96L08 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
SUSD3Q96L08 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SUSD3Q96L08 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.39■□□□□ 0.21
SUSD3Q96L08 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SUSD3Q96L08 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SUSD3Q96L08 AC104457.1-201ENST00000401024 814 ntBASIC16.39■□□□□ 0.21
SUSD3Q96L08 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SUSD3Q96L08 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms