Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CHAMP1Q96JM3 AP000845.1-201ENST00000581677 2131 ntBASIC18.16■□□□□ 0.5
CHAMP1Q96JM3 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
CHAMP1Q96JM3 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
CHAMP1Q96JM3 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC18.15■□□□□ 0.5
CHAMP1Q96JM3 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHAMP1Q96JM3 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHAMP1Q96JM3 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHAMP1Q96JM3 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC18.15■□□□□ 0.5
CHAMP1Q96JM3 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC18.15■□□□□ 0.5
CHAMP1Q96JM3 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC18.15■□□□□ 0.5
CHAMP1Q96JM3 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
CHAMP1Q96JM3 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC18.15■□□□□ 0.5
CHAMP1Q96JM3 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CHAMP1Q96JM3 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CHAMP1Q96JM3 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CHAMP1Q96JM3 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CHAMP1Q96JM3 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC18.15■□□□□ 0.5
CHAMP1Q96JM3 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC18.15■□□□□ 0.5
CHAMP1Q96JM3 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.15■□□□□ 0.5
CHAMP1Q96JM3 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC18.15■□□□□ 0.5
CHAMP1Q96JM3 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHAMP1Q96JM3 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CHAMP1Q96JM3 SLC25A39P2-201ENST00000537614 270 ntBASIC18.15■□□□□ 0.5
CHAMP1Q96JM3 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CHAMP1Q96JM3 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC18.15■□□□□ 0.5
CHAMP1Q96JM3 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.15■□□□□ 0.5
CHAMP1Q96JM3 AC092364.2-202ENST00000597012 1073 ntBASIC18.15■□□□□ 0.5
CHAMP1Q96JM3 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC18.15■□□□□ 0.5
CHAMP1Q96JM3 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHAMP1Q96JM3 AP3S2-216ENST00000617003 1561 ntBASIC18.15■□□□□ 0.5
CHAMP1Q96JM3 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHAMP1Q96JM3 AC018529.2-202ENST00000611482 3087 ntBASIC18.15■□□□□ 0.5
CHAMP1Q96JM3 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHAMP1Q96JM3 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CHAMP1Q96JM3 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHAMP1Q96JM3 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
CHAMP1Q96JM3 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHAMP1Q96JM3 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
CHAMP1Q96JM3 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHAMP1Q96JM3 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC18.15■□□□□ 0.5
CHAMP1Q96JM3 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC18.15■□□□□ 0.5
CHAMP1Q96JM3 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHAMP1Q96JM3 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHAMP1Q96JM3 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
CHAMP1Q96JM3 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC18.14■□□□□ 0.49
CHAMP1Q96JM3 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CHAMP1Q96JM3 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC18.14■□□□□ 0.49
CHAMP1Q96JM3 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHAMP1Q96JM3 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CHAMP1Q96JM3 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CHAMP1Q96JM3 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHAMP1Q96JM3 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC18.14■□□□□ 0.49
CHAMP1Q96JM3 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHAMP1Q96JM3 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC18.14■□□□□ 0.49
CHAMP1Q96JM3 UPF3AP3-201ENST00000420996 769 ntBASIC18.14■□□□□ 0.49
CHAMP1Q96JM3 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.14■□□□□ 0.49
CHAMP1Q96JM3 KRT18P3-201ENST00000451602 1288 ntBASIC18.14■□□□□ 0.49
CHAMP1Q96JM3 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC18.14■□□□□ 0.49
CHAMP1Q96JM3 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CHAMP1Q96JM3 MIR3687-2-201ENST00000577708 61 ntBASIC18.14■□□□□ 0.49
CHAMP1Q96JM3 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.14■□□□□ 0.49
CHAMP1Q96JM3 MIR3687-1-201ENST00000614492 61 ntBASIC18.14■□□□□ 0.49
CHAMP1Q96JM3 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHAMP1Q96JM3 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CHAMP1Q96JM3 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHAMP1Q96JM3 AP001267.2-201ENST00000532619 2086 ntBASIC18.14■□□□□ 0.49
CHAMP1Q96JM3 AKAP8P1-201ENST00000434743 1349 ntBASIC18.14■□□□□ 0.49
CHAMP1Q96JM3 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CHAMP1Q96JM3 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CHAMP1Q96JM3 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHAMP1Q96JM3 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CHAMP1Q96JM3 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHAMP1Q96JM3 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHAMP1Q96JM3 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHAMP1Q96JM3 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHAMP1Q96JM3 SLC9A7P1-202ENST00000556476 2239 ntBASIC18.14■□□□□ 0.49
CHAMP1Q96JM3 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC18.14■□□□□ 0.49
CHAMP1Q96JM3 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHAMP1Q96JM3 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHAMP1Q96JM3 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CHAMP1Q96JM3 NORAD-201ENST00000565493 5339 ntBASIC18.13■□□□□ 0.49
CHAMP1Q96JM3 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CHAMP1Q96JM3 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CHAMP1Q96JM3 RDX-218ENST00000544551 4117 ntTSL 2 BASIC18.13■□□□□ 0.49
CHAMP1Q96JM3 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
CHAMP1Q96JM3 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC18.13■□□□□ 0.49
CHAMP1Q96JM3 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHAMP1Q96JM3 PCDHGB8P-201ENST00000502926 1973 ntBASIC18.13■□□□□ 0.49
CHAMP1Q96JM3 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHAMP1Q96JM3 MROH4P-201ENST00000431302 1578 ntBASIC18.13■□□□□ 0.49
CHAMP1Q96JM3 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC18.13■□□□□ 0.49
CHAMP1Q96JM3 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
CHAMP1Q96JM3 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHAMP1Q96JM3 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC18.13■□□□□ 0.49
CHAMP1Q96JM3 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHAMP1Q96JM3 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
CHAMP1Q96JM3 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC18.13■□□□□ 0.49
CHAMP1Q96JM3 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHAMP1Q96JM3 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms