Protein–RNA interactions for Protein: Q96B67

ARRDC3, Arrestin domain-containing protein 3, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARRDC3Q96B67 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
ARRDC3Q96B67 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
ARRDC3Q96B67 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ARRDC3Q96B67 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.5■□□□□ 0.07
ARRDC3Q96B67 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ARRDC3Q96B67 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ARRDC3Q96B67 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
ARRDC3Q96B67 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ARRDC3Q96B67 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ARRDC3Q96B67 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ARRDC3Q96B67 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.5■□□□□ 0.07
ARRDC3Q96B67 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.5■□□□□ 0.07
ARRDC3Q96B67 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.5■□□□□ 0.07
ARRDC3Q96B67 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
ARRDC3Q96B67 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC15.5■□□□□ 0.07
ARRDC3Q96B67 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ARRDC3Q96B67 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC15.5■□□□□ 0.07
ARRDC3Q96B67 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC15.5■□□□□ 0.07
ARRDC3Q96B67 BNIP3P42-201ENST00000454982 569 ntBASIC15.5■□□□□ 0.07
ARRDC3Q96B67 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.5■□□□□ 0.07
ARRDC3Q96B67 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.5■□□□□ 0.07
ARRDC3Q96B67 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC15.5■□□□□ 0.07
ARRDC3Q96B67 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
ARRDC3Q96B67 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC15.5■□□□□ 0.07
ARRDC3Q96B67 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC15.5■□□□□ 0.07
ARRDC3Q96B67 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.5■□□□□ 0.07
ARRDC3Q96B67 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC15.5■□□□□ 0.07
ARRDC3Q96B67 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC15.5■□□□□ 0.07
ARRDC3Q96B67 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.5■□□□□ 0.07
ARRDC3Q96B67 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC15.5■□□□□ 0.07
ARRDC3Q96B67 BNIP3P29-201ENST00000598302 571 ntBASIC15.5■□□□□ 0.07
ARRDC3Q96B67 AP005019.2-201ENST00000615104 511 ntBASIC15.5■□□□□ 0.07
ARRDC3Q96B67 AC011447.5-201ENST00000616168 564 ntBASIC15.5■□□□□ 0.07
ARRDC3Q96B67 PFAS-212ENST00000625942 396 ntTSL 5 BASIC15.5■□□□□ 0.07
ARRDC3Q96B67 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
ARRDC3Q96B67 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ARRDC3Q96B67 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.5■□□□□ 0.07
ARRDC3Q96B67 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.5■□□□□ 0.07
ARRDC3Q96B67 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ARRDC3Q96B67 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ARRDC3Q96B67 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
ARRDC3Q96B67 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
ARRDC3Q96B67 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ARRDC3Q96B67 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC15.5■□□□□ 0.07
ARRDC3Q96B67 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ARRDC3Q96B67 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
ARRDC3Q96B67 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC15.5■□□□□ 0.07
ARRDC3Q96B67 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
ARRDC3Q96B67 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ARRDC3Q96B67 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.5■□□□□ 0.07
ARRDC3Q96B67 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
ARRDC3Q96B67 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
ARRDC3Q96B67 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ARRDC3Q96B67 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ARRDC3Q96B67 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
ARRDC3Q96B67 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
ARRDC3Q96B67 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.49■□□□□ 0.07
ARRDC3Q96B67 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
ARRDC3Q96B67 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ARRDC3Q96B67 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
ARRDC3Q96B67 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.49■□□□□ 0.07
ARRDC3Q96B67 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ARRDC3Q96B67 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.49■□□□□ 0.07
ARRDC3Q96B67 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
ARRDC3Q96B67 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
ARRDC3Q96B67 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ARRDC3Q96B67 RNU1-114P-201ENST00000365297 166 ntBASIC15.49■□□□□ 0.07
ARRDC3Q96B67 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ARRDC3Q96B67 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.49■□□□□ 0.07
ARRDC3Q96B67 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC15.49■□□□□ 0.07
ARRDC3Q96B67 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC15.49■□□□□ 0.07
ARRDC3Q96B67 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC15.49■□□□□ 0.07
ARRDC3Q96B67 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.49■□□□□ 0.07
ARRDC3Q96B67 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.49■□□□□ 0.07
ARRDC3Q96B67 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC15.49■□□□□ 0.07
ARRDC3Q96B67 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.49■□□□□ 0.07
ARRDC3Q96B67 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
ARRDC3Q96B67 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.49■□□□□ 0.07
ARRDC3Q96B67 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.49■□□□□ 0.07
ARRDC3Q96B67 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
ARRDC3Q96B67 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ARRDC3Q96B67 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
ARRDC3Q96B67 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
ARRDC3Q96B67 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
ARRDC3Q96B67 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
ARRDC3Q96B67 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.49■□□□□ 0.07
ARRDC3Q96B67 AC092850.2-201ENST00000623821 2697 ntBASIC15.49■□□□□ 0.07
ARRDC3Q96B67 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.48■□□□□ 0.07
ARRDC3Q96B67 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
ARRDC3Q96B67 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
ARRDC3Q96B67 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
ARRDC3Q96B67 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
ARRDC3Q96B67 AC105250.1-201ENST00000509378 2057 ntBASIC15.48■□□□□ 0.07
ARRDC3Q96B67 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC15.48■□□□□ 0.07
ARRDC3Q96B67 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
ARRDC3Q96B67 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
ARRDC3Q96B67 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
ARRDC3Q96B67 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
ARRDC3Q96B67 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
ARRDC3Q96B67 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms