Protein–RNA interactions for Protein: Q8WUX9

CHMP7, Charged multivesicular body protein 7, humanhuman

Predicted RBP Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7Q8WUX9 KLF2P1-201ENST00000447438 1042 ntBASIC24.78■■□□□ 1.56
CHMP7Q8WUX9 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
CHMP7Q8WUX9 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC24.78■■□□□ 1.56
CHMP7Q8WUX9 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC24.78■■□□□ 1.56
CHMP7Q8WUX9 MEG3_2.1-201ENST00000611456 105 ntBASIC24.78■■□□□ 1.56
CHMP7Q8WUX9 AP001527.2-201ENST00000614441 631 ntBASIC24.78■■□□□ 1.56
CHMP7Q8WUX9 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC24.78■■□□□ 1.56
CHMP7Q8WUX9 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC24.78■■□□□ 1.56
CHMP7Q8WUX9 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
CHMP7Q8WUX9 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CHMP7Q8WUX9 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC24.78■■□□□ 1.56
CHMP7Q8WUX9 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CHMP7Q8WUX9 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
CHMP7Q8WUX9 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC24.78■■□□□ 1.56
CHMP7Q8WUX9 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC24.78■■□□□ 1.56
CHMP7Q8WUX9 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
CHMP7Q8WUX9 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
CHMP7Q8WUX9 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC24.78■■□□□ 1.56
CHMP7Q8WUX9 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
CHMP7Q8WUX9 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC24.77■■□□□ 1.56
CHMP7Q8WUX9 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CHMP7Q8WUX9 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CHMP7Q8WUX9 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CHMP7Q8WUX9 AC006449.6-201ENST00000612330 2296 ntBASIC24.77■■□□□ 1.56
CHMP7Q8WUX9 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
CHMP7Q8WUX9 AC026320.2-201ENST00000434379 478 ntBASIC24.77■■□□□ 1.56
CHMP7Q8WUX9 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC24.77■■□□□ 1.56
CHMP7Q8WUX9 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC24.77■■□□□ 1.56
CHMP7Q8WUX9 CDC23-208ENST00000505120 455 ntTSL 3 BASIC24.77■■□□□ 1.56
CHMP7Q8WUX9 AC008723.1-201ENST00000506922 207 ntBASIC24.77■■□□□ 1.56
CHMP7Q8WUX9 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC24.77■■□□□ 1.56
CHMP7Q8WUX9 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC24.77■■□□□ 1.56
CHMP7Q8WUX9 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC24.77■■□□□ 1.56
CHMP7Q8WUX9 RN7SL596P-201ENST00000582123 288 ntBASIC24.77■■□□□ 1.56
CHMP7Q8WUX9 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC24.77■■□□□ 1.56
CHMP7Q8WUX9 AC138466.4-201ENST00000623965 852 ntBASIC24.77■■□□□ 1.56
CHMP7Q8WUX9 CASP16P-204ENST00000635032 809 ntBASIC24.77■■□□□ 1.56
CHMP7Q8WUX9 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
CHMP7Q8WUX9 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC24.77■■□□□ 1.56
CHMP7Q8WUX9 AC018695.7-201ENST00000624587 2492 ntBASIC24.77■■□□□ 1.56
CHMP7Q8WUX9 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC24.77■■□□□ 1.56
CHMP7Q8WUX9 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC24.77■■□□□ 1.56
CHMP7Q8WUX9 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CHMP7Q8WUX9 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
CHMP7Q8WUX9 KRT8P21-201ENST00000430398 1491 ntBASIC24.77■■□□□ 1.56
CHMP7Q8WUX9 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC24.77■■□□□ 1.56
CHMP7Q8WUX9 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
CHMP7Q8WUX9 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CHMP7Q8WUX9 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC24.76■■□□□ 1.55
CHMP7Q8WUX9 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CHMP7Q8WUX9 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
CHMP7Q8WUX9 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CHMP7Q8WUX9 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC24.76■■□□□ 1.55
CHMP7Q8WUX9 SOD2-202ENST00000367054 815 ntTSL 2 BASIC24.76■■□□□ 1.55
CHMP7Q8WUX9 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
CHMP7Q8WUX9 AL592076.1-201ENST00000424448 303 ntBASIC24.76■■□□□ 1.55
CHMP7Q8WUX9 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC24.76■■□□□ 1.55
CHMP7Q8WUX9 FAU-202ENST00000434372 533 ntTSL 2 BASIC24.76■■□□□ 1.55
CHMP7Q8WUX9 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC24.76■■□□□ 1.55
CHMP7Q8WUX9 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC24.76■■□□□ 1.55
CHMP7Q8WUX9 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
CHMP7Q8WUX9 REEP5-205ENST00000504247 480 ntTSL 5 BASIC24.76■■□□□ 1.55
CHMP7Q8WUX9 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC24.76■■□□□ 1.55
CHMP7Q8WUX9 SCARNA21-201ENST00000517026 139 ntBASIC24.76■■□□□ 1.55
CHMP7Q8WUX9 ALG1L13P-202ENST00000519320 584 ntBASIC24.76■■□□□ 1.55
CHMP7Q8WUX9 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
CHMP7Q8WUX9 CCNC-217ENST00000523985 958 ntTSL 2 BASIC24.76■■□□□ 1.55
CHMP7Q8WUX9 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC24.76■■□□□ 1.55
CHMP7Q8WUX9 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CHMP7Q8WUX9 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CHMP7Q8WUX9 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC24.76■■□□□ 1.55
CHMP7Q8WUX9 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC24.76■■□□□ 1.55
CHMP7Q8WUX9 AMT-239ENST00000636865 1914 ntTSL 5 BASIC24.76■■□□□ 1.55
CHMP7Q8WUX9 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
CHMP7Q8WUX9 AR-207ENST00000612010 3896 ntTSL 5 BASIC24.76■■□□□ 1.55
CHMP7Q8WUX9 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
CHMP7Q8WUX9 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CHMP7Q8WUX9 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC24.76■■□□□ 1.55
CHMP7Q8WUX9 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
CHMP7Q8WUX9 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CHMP7Q8WUX9 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
CHMP7Q8WUX9 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC24.75■■□□□ 1.55
CHMP7Q8WUX9 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC24.75■■□□□ 1.55
CHMP7Q8WUX9 RPL18AP3-201ENST00000462885 528 ntBASIC24.75■■□□□ 1.55
CHMP7Q8WUX9 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC24.75■■□□□ 1.55
CHMP7Q8WUX9 FO393412.1-201ENST00000619841 382 ntBASIC24.75■■□□□ 1.55
CHMP7Q8WUX9 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC24.75■■□□□ 1.55
CHMP7Q8WUX9 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC24.75■■□□□ 1.55
CHMP7Q8WUX9 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CHMP7Q8WUX9 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
CHMP7Q8WUX9 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CHMP7Q8WUX9 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CHMP7Q8WUX9 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
CHMP7Q8WUX9 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CHMP7Q8WUX9 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CHMP7Q8WUX9 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CHMP7Q8WUX9 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CHMP7Q8WUX9 RBM38-204ENST00000371219 760 ntTSL 2 BASIC24.74■■□□□ 1.55
CHMP7Q8WUX9 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC24.74■■□□□ 1.55
CHMP7Q8WUX9 AC012441.2-201ENST00000444843 739 ntBASIC24.74■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms