Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL22A1Q8NFW1 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
COL22A1Q8NFW1 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL22A1Q8NFW1 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL22A1Q8NFW1 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC20.19■□□□□ 0.82
COL22A1Q8NFW1 KRT18P9-201ENST00000604826 1300 ntBASIC20.19■□□□□ 0.82
COL22A1Q8NFW1 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL22A1Q8NFW1 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL22A1Q8NFW1 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC20.19■□□□□ 0.82
COL22A1Q8NFW1 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
COL22A1Q8NFW1 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC20.19■□□□□ 0.82
COL22A1Q8NFW1 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC20.19■□□□□ 0.82
COL22A1Q8NFW1 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL22A1Q8NFW1 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
COL22A1Q8NFW1 ETV2-207ENST00000619399 994 ntTSL 5 BASIC20.19■□□□□ 0.82
COL22A1Q8NFW1 AC148477.9-201ENST00000623974 539 ntBASIC20.19■□□□□ 0.82
COL22A1Q8NFW1 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC20.19■□□□□ 0.82
COL22A1Q8NFW1 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL22A1Q8NFW1 AC018629.1-201ENST00000623381 1736 ntBASIC20.19■□□□□ 0.82
COL22A1Q8NFW1 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL22A1Q8NFW1 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC20.19■□□□□ 0.82
COL22A1Q8NFW1 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL22A1Q8NFW1 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL22A1Q8NFW1 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL22A1Q8NFW1 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL22A1Q8NFW1 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL22A1Q8NFW1 STK26-204ENST00000481105 1835 ntTSL 2 BASIC20.18■□□□□ 0.82
COL22A1Q8NFW1 CEP83-AS1-201ENST00000623122 2482 ntBASIC20.18■□□□□ 0.82
COL22A1Q8NFW1 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC20.18■□□□□ 0.82
COL22A1Q8NFW1 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL22A1Q8NFW1 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC20.18■□□□□ 0.82
COL22A1Q8NFW1 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC20.18■□□□□ 0.82
COL22A1Q8NFW1 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC20.18■□□□□ 0.82
COL22A1Q8NFW1 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC20.18■□□□□ 0.82
COL22A1Q8NFW1 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
COL22A1Q8NFW1 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC20.18■□□□□ 0.82
COL22A1Q8NFW1 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC20.18■□□□□ 0.82
COL22A1Q8NFW1 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC20.18■□□□□ 0.82
COL22A1Q8NFW1 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL22A1Q8NFW1 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
COL22A1Q8NFW1 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
COL22A1Q8NFW1 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL22A1Q8NFW1 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL22A1Q8NFW1 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
COL22A1Q8NFW1 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
COL22A1Q8NFW1 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
COL22A1Q8NFW1 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
COL22A1Q8NFW1 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL22A1Q8NFW1 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
COL22A1Q8NFW1 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL22A1Q8NFW1 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL22A1Q8NFW1 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC20.18■□□□□ 0.82
COL22A1Q8NFW1 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
COL22A1Q8NFW1 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL22A1Q8NFW1 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC20.17■□□□□ 0.82
COL22A1Q8NFW1 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
COL22A1Q8NFW1 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
COL22A1Q8NFW1 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC20.17■□□□□ 0.82
COL22A1Q8NFW1 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC20.17■□□□□ 0.82
COL22A1Q8NFW1 LINC00634-202ENST00000505157 222 ntBASIC20.17■□□□□ 0.82
COL22A1Q8NFW1 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC20.17■□□□□ 0.82
COL22A1Q8NFW1 HKR1-225ENST00000592168 566 ntTSL 4 BASIC20.17■□□□□ 0.82
COL22A1Q8NFW1 AC009884.2-201ENST00000603110 324 ntBASIC20.17■□□□□ 0.82
COL22A1Q8NFW1 LINC01783-202ENST00000614408 828 ntBASIC20.17■□□□□ 0.82
COL22A1Q8NFW1 BX284668.2-205ENST00000619677 828 ntBASIC20.17■□□□□ 0.82
COL22A1Q8NFW1 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL22A1Q8NFW1 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL22A1Q8NFW1 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC20.17■□□□□ 0.82
COL22A1Q8NFW1 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL22A1Q8NFW1 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC20.17■□□□□ 0.82
COL22A1Q8NFW1 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
COL22A1Q8NFW1 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
COL22A1Q8NFW1 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL22A1Q8NFW1 LINC01815-202ENST00000641468 1409 ntBASIC20.17■□□□□ 0.82
COL22A1Q8NFW1 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC20.17■□□□□ 0.82
COL22A1Q8NFW1 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC20.17■□□□□ 0.82
COL22A1Q8NFW1 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL22A1Q8NFW1 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
COL22A1Q8NFW1 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
COL22A1Q8NFW1 MTHFR-217ENST00000641820 1569 ntBASIC20.17■□□□□ 0.82
COL22A1Q8NFW1 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL22A1Q8NFW1 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
COL22A1Q8NFW1 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
COL22A1Q8NFW1 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC20.16■□□□□ 0.82
COL22A1Q8NFW1 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC20.16■□□□□ 0.82
COL22A1Q8NFW1 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
COL22A1Q8NFW1 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC20.16■□□□□ 0.82
COL22A1Q8NFW1 HCG27-204ENST00000424675 895 ntTSL 3 BASIC20.16■□□□□ 0.82
COL22A1Q8NFW1 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
COL22A1Q8NFW1 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC20.16■□□□□ 0.82
COL22A1Q8NFW1 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC20.16■□□□□ 0.82
COL22A1Q8NFW1 NEU3-207ENST00000534628 746 ntTSL 2 BASIC20.16■□□□□ 0.82
COL22A1Q8NFW1 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
COL22A1Q8NFW1 AC011247.3-201ENST00000603297 438 ntBASIC20.16■□□□□ 0.82
COL22A1Q8NFW1 AC073592.2-201ENST00000623062 780 ntBASIC20.16■□□□□ 0.82
COL22A1Q8NFW1 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC20.16■□□□□ 0.82
COL22A1Q8NFW1 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL22A1Q8NFW1 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL22A1Q8NFW1 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
COL22A1Q8NFW1 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms