Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.18■□□□□ 0.18
PHTF2Q8N3S3 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.18■□□□□ 0.18
PHTF2Q8N3S3 AC015936.2-201ENST00000593177 259 ntBASIC16.18■□□□□ 0.18
PHTF2Q8N3S3 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.18■□□□□ 0.18
PHTF2Q8N3S3 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PHTF2Q8N3S3 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
PHTF2Q8N3S3 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
PHTF2Q8N3S3 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PHTF2Q8N3S3 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.18■□□□□ 0.18
PHTF2Q8N3S3 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.18■□□□□ 0.18
PHTF2Q8N3S3 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PHTF2Q8N3S3 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
PHTF2Q8N3S3 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PHTF2Q8N3S3 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
PHTF2Q8N3S3 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PHTF2Q8N3S3 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
PHTF2Q8N3S3 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PHTF2Q8N3S3 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
PHTF2Q8N3S3 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.17■□□□□ 0.18
PHTF2Q8N3S3 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PHTF2Q8N3S3 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PHTF2Q8N3S3 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PHTF2Q8N3S3 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PHTF2Q8N3S3 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.17■□□□□ 0.18
PHTF2Q8N3S3 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PHTF2Q8N3S3 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PHTF2Q8N3S3 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.17■□□□□ 0.18
PHTF2Q8N3S3 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PHTF2Q8N3S3 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PHTF2Q8N3S3 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
PHTF2Q8N3S3 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
PHTF2Q8N3S3 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC16.17■□□□□ 0.18
PHTF2Q8N3S3 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC16.17■□□□□ 0.18
PHTF2Q8N3S3 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.17■□□□□ 0.18
PHTF2Q8N3S3 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PHTF2Q8N3S3 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.17■□□□□ 0.18
PHTF2Q8N3S3 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC16.17■□□□□ 0.18
PHTF2Q8N3S3 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC16.17■□□□□ 0.18
PHTF2Q8N3S3 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.17■□□□□ 0.18
PHTF2Q8N3S3 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC16.17■□□□□ 0.18
PHTF2Q8N3S3 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC16.17■□□□□ 0.18
PHTF2Q8N3S3 SNX29P1-201ENST00000548357 1007 ntBASIC16.17■□□□□ 0.18
PHTF2Q8N3S3 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PHTF2Q8N3S3 AC097359.3-201ENST00000603982 1210 ntBASIC16.17■□□□□ 0.18
PHTF2Q8N3S3 ABBA01031660.1-201ENST00000635219 756 ntBASIC16.17■□□□□ 0.18
PHTF2Q8N3S3 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
PHTF2Q8N3S3 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PHTF2Q8N3S3 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
PHTF2Q8N3S3 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
PHTF2Q8N3S3 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PHTF2Q8N3S3 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.17■□□□□ 0.18
PHTF2Q8N3S3 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PHTF2Q8N3S3 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.17■□□□□ 0.18
PHTF2Q8N3S3 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PHTF2Q8N3S3 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PHTF2Q8N3S3 REXO1L1P-202ENST00000608646 1974 ntBASIC16.17■□□□□ 0.18
PHTF2Q8N3S3 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PHTF2Q8N3S3 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PHTF2Q8N3S3 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
PHTF2Q8N3S3 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
PHTF2Q8N3S3 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PHTF2Q8N3S3 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PHTF2Q8N3S3 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.16■□□□□ 0.18
PHTF2Q8N3S3 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.16■□□□□ 0.18
PHTF2Q8N3S3 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.16■□□□□ 0.18
PHTF2Q8N3S3 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PHTF2Q8N3S3 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PHTF2Q8N3S3 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PHTF2Q8N3S3 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PHTF2Q8N3S3 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PHTF2Q8N3S3 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC16.16■□□□□ 0.18
PHTF2Q8N3S3 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.16■□□□□ 0.18
PHTF2Q8N3S3 HIST1H2BPS3-201ENST00000419683 341 ntBASIC16.16■□□□□ 0.18
PHTF2Q8N3S3 RPS2P32-201ENST00000439199 892 ntBASIC16.16■□□□□ 0.18
PHTF2Q8N3S3 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC16.16■□□□□ 0.18
PHTF2Q8N3S3 FAM86LP-201ENST00000478302 853 ntBASIC16.16■□□□□ 0.18
PHTF2Q8N3S3 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC16.16■□□□□ 0.18
PHTF2Q8N3S3 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.16■□□□□ 0.18
PHTF2Q8N3S3 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PHTF2Q8N3S3 NAA38-206ENST00000576384 424 ntTSL 2 BASIC16.16■□□□□ 0.18
PHTF2Q8N3S3 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PHTF2Q8N3S3 Six3os1_5.1-201ENST00000611000 271 ntBASIC16.16■□□□□ 0.18
PHTF2Q8N3S3 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
PHTF2Q8N3S3 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PHTF2Q8N3S3 AC112504.1-201ENST00000623415 1841 ntBASIC16.16■□□□□ 0.18
PHTF2Q8N3S3 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PHTF2Q8N3S3 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PHTF2Q8N3S3 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.16■□□□□ 0.18
PHTF2Q8N3S3 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PHTF2Q8N3S3 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
PHTF2Q8N3S3 AC022532.1-201ENST00000624563 1728 ntBASIC16.16■□□□□ 0.18
PHTF2Q8N3S3 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
PHTF2Q8N3S3 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PHTF2Q8N3S3 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PHTF2Q8N3S3 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PHTF2Q8N3S3 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PHTF2Q8N3S3 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PHTF2Q8N3S3 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PHTF2Q8N3S3 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.15■□□□□ 0.18
PHTF2Q8N3S3 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms