Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SIX5Q8N196 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC16.03■□□□□ 0.16
SIX5Q8N196 AC026410.3-201ENST00000514280 936 ntBASIC16.03■□□□□ 0.16
SIX5Q8N196 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC16.03■□□□□ 0.16
SIX5Q8N196 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC16.03■□□□□ 0.16
SIX5Q8N196 NAT9-224ENST00000583757 583 ntTSL 3 BASIC16.03■□□□□ 0.16
SIX5Q8N196 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC16.03■□□□□ 0.16
SIX5Q8N196 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SIX5Q8N196 AC093813.1-201ENST00000605066 256 ntBASIC16.03■□□□□ 0.16
SIX5Q8N196 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.03■□□□□ 0.16
SIX5Q8N196 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SIX5Q8N196 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SIX5Q8N196 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SIX5Q8N196 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
SIX5Q8N196 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SIX5Q8N196 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SIX5Q8N196 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.03■□□□□ 0.16
SIX5Q8N196 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SIX5Q8N196 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SIX5Q8N196 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
SIX5Q8N196 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
SIX5Q8N196 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.03■□□□□ 0.16
SIX5Q8N196 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SIX5Q8N196 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.03■□□□□ 0.16
SIX5Q8N196 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SIX5Q8N196 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.03■□□□□ 0.16
SIX5Q8N196 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SIX5Q8N196 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC16.03■□□□□ 0.16
SIX5Q8N196 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.03■□□□□ 0.16
SIX5Q8N196 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SIX5Q8N196 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SIX5Q8N196 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SIX5Q8N196 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC16.02■□□□□ 0.16
SIX5Q8N196 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
SIX5Q8N196 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SIX5Q8N196 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SIX5Q8N196 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SIX5Q8N196 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.02■□□□□ 0.16
SIX5Q8N196 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SIX5Q8N196 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SIX5Q8N196 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SIX5Q8N196 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SIX5Q8N196 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.02■□□□□ 0.16
SIX5Q8N196 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
SIX5Q8N196 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC16.02■□□□□ 0.16
SIX5Q8N196 CSH2-202ENST00000345366 598 ntTSL 5 BASIC16.02■□□□□ 0.16
SIX5Q8N196 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SIX5Q8N196 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SIX5Q8N196 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC16.02■□□□□ 0.16
SIX5Q8N196 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC16.02■□□□□ 0.16
SIX5Q8N196 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC16.02■□□□□ 0.16
SIX5Q8N196 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SIX5Q8N196 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SIX5Q8N196 KRT18P25-201ENST00000508931 1278 ntBASIC16.02■□□□□ 0.16
SIX5Q8N196 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
SIX5Q8N196 MIR4722-201ENST00000578292 60 ntBASIC16.02■□□□□ 0.16
SIX5Q8N196 MIR4706-201ENST00000582134 82 ntBASIC16.02■□□□□ 0.16
SIX5Q8N196 EEF1DP1-201ENST00000585891 896 ntBASIC16.02■□□□□ 0.16
SIX5Q8N196 AC000095.1-201ENST00000603208 874 ntBASIC16.02■□□□□ 0.16
SIX5Q8N196 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.02■□□□□ 0.16
SIX5Q8N196 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC16.02■□□□□ 0.16
SIX5Q8N196 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.02■□□□□ 0.15
SIX5Q8N196 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
SIX5Q8N196 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SIX5Q8N196 AL121723.1-201ENST00000445194 1519 ntBASIC16.02■□□□□ 0.15
SIX5Q8N196 AC015818.8-201ENST00000587907 1519 ntBASIC16.02■□□□□ 0.15
SIX5Q8N196 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
SIX5Q8N196 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
SIX5Q8N196 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SIX5Q8N196 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SIX5Q8N196 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SIX5Q8N196 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
SIX5Q8N196 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.02■□□□□ 0.15
SIX5Q8N196 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SIX5Q8N196 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SIX5Q8N196 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SIX5Q8N196 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
SIX5Q8N196 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC16.02■□□□□ 0.15
SIX5Q8N196 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SIX5Q8N196 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SIX5Q8N196 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SIX5Q8N196 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SIX5Q8N196 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SIX5Q8N196 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.01■□□□□ 0.15
SIX5Q8N196 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SIX5Q8N196 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SIX5Q8N196 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
SIX5Q8N196 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
SIX5Q8N196 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.01■□□□□ 0.15
SIX5Q8N196 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.01■□□□□ 0.15
SIX5Q8N196 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.01■□□□□ 0.15
SIX5Q8N196 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SIX5Q8N196 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
SIX5Q8N196 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SIX5Q8N196 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SIX5Q8N196 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SIX5Q8N196 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
SIX5Q8N196 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SIX5Q8N196 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
SIX5Q8N196 PGGT1BP2-201ENST00000398621 1028 ntBASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms