Protein–RNA interactions for Protein: Q8IYT3

CCDC170, Coiled-coil domain-containing protein 170, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170Q8IYT3 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC170Q8IYT3 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
CCDC170Q8IYT3 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC170Q8IYT3 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC170Q8IYT3 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC16.83■□□□□ 0.28
CCDC170Q8IYT3 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC170Q8IYT3 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC16.82■□□□□ 0.28
CCDC170Q8IYT3 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC170Q8IYT3 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CCDC170Q8IYT3 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CCDC170Q8IYT3 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC170Q8IYT3 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
CCDC170Q8IYT3 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC170Q8IYT3 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC170Q8IYT3 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
CCDC170Q8IYT3 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CCDC170Q8IYT3 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC170Q8IYT3 PCDHA3-202ENST00000532566 4594 ntBASIC16.82■□□□□ 0.28
CCDC170Q8IYT3 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC170Q8IYT3 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC170Q8IYT3 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC170Q8IYT3 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC16.82■□□□□ 0.28
CCDC170Q8IYT3 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC170Q8IYT3 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC170Q8IYT3 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC170Q8IYT3 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CCDC170Q8IYT3 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC170Q8IYT3 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC170Q8IYT3 RNA5SP416-201ENST00000516838 111 ntBASIC16.82■□□□□ 0.28
CCDC170Q8IYT3 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC170Q8IYT3 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
CCDC170Q8IYT3 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.82■□□□□ 0.28
CCDC170Q8IYT3 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.82■□□□□ 0.28
CCDC170Q8IYT3 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC170Q8IYT3 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC170Q8IYT3 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.82■□□□□ 0.28
CCDC170Q8IYT3 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.82■□□□□ 0.28
CCDC170Q8IYT3 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.82■□□□□ 0.28
CCDC170Q8IYT3 AC084121.4-201ENST00000641598 221 ntBASIC16.82■□□□□ 0.28
CCDC170Q8IYT3 AF228730.8-201ENST00000642140 221 ntBASIC16.82■□□□□ 0.28
CCDC170Q8IYT3 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC170Q8IYT3 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC170Q8IYT3 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC16.82■□□□□ 0.28
CCDC170Q8IYT3 AC140479.7-201ENST00000636301 2332 ntBASIC16.82■□□□□ 0.28
CCDC170Q8IYT3 AC007686.3-201ENST00000619017 3487 ntBASIC16.82■□□□□ 0.28
CCDC170Q8IYT3 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC170Q8IYT3 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC170Q8IYT3 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC170Q8IYT3 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CCDC170Q8IYT3 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
CCDC170Q8IYT3 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC170Q8IYT3 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.82■□□□□ 0.28
CCDC170Q8IYT3 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC170Q8IYT3 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC170Q8IYT3 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC170Q8IYT3 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC170Q8IYT3 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC170Q8IYT3 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CCDC170Q8IYT3 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC170Q8IYT3 AP3S2-216ENST00000617003 1561 ntBASIC16.81■□□□□ 0.28
CCDC170Q8IYT3 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CCDC170Q8IYT3 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC170Q8IYT3 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC170Q8IYT3 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC170Q8IYT3 REXO1L2P-201ENST00000425429 2069 ntBASIC16.81■□□□□ 0.28
CCDC170Q8IYT3 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC170Q8IYT3 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC170Q8IYT3 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CCDC170Q8IYT3 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CCDC170Q8IYT3 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC170Q8IYT3 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC170Q8IYT3 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CCDC170Q8IYT3 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC170Q8IYT3 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC170Q8IYT3 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC170Q8IYT3 AL591424.1-201ENST00000442569 1213 ntBASIC16.81■□□□□ 0.28
CCDC170Q8IYT3 AC009078.2-202ENST00000463353 338 ntBASIC16.81■□□□□ 0.28
CCDC170Q8IYT3 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.81■□□□□ 0.28
CCDC170Q8IYT3 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC170Q8IYT3 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.81■□□□□ 0.28
CCDC170Q8IYT3 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC170Q8IYT3 AC092902.6-201ENST00000641783 218 ntBASIC16.81■□□□□ 0.28
CCDC170Q8IYT3 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC170Q8IYT3 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC170Q8IYT3 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC170Q8IYT3 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
CCDC170Q8IYT3 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC170Q8IYT3 AL359258.3-201ENST00000622910 2331 ntBASIC16.81■□□□□ 0.28
CCDC170Q8IYT3 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CCDC170Q8IYT3 CICP11-201ENST00000434745 2827 ntBASIC16.81■□□□□ 0.28
CCDC170Q8IYT3 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC170Q8IYT3 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC170Q8IYT3 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC170Q8IYT3 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.81■□□□□ 0.28
CCDC170Q8IYT3 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC170Q8IYT3 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC170Q8IYT3 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC170Q8IYT3 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC170Q8IYT3 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC170Q8IYT3 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms