Protein–RNA interactions for Protein: Q7Z401

DENND4A, C-myc promoter-binding protein, humanhuman

Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4AQ7Z401 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
DENND4AQ7Z401 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
DENND4AQ7Z401 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
DENND4AQ7Z401 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
DENND4AQ7Z401 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
DENND4AQ7Z401 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
DENND4AQ7Z401 AP000593.2-201ENST00000542775 1433 ntBASIC15.74■□□□□ 0.11
DENND4AQ7Z401 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.74■□□□□ 0.11
DENND4AQ7Z401 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
DENND4AQ7Z401 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.74■□□□□ 0.11
DENND4AQ7Z401 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.74■□□□□ 0.11
DENND4AQ7Z401 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
DENND4AQ7Z401 AC006480.2-201ENST00000609770 1337 ntBASIC15.74■□□□□ 0.11
DENND4AQ7Z401 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
DENND4AQ7Z401 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.74■□□□□ 0.11
DENND4AQ7Z401 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
DENND4AQ7Z401 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
DENND4AQ7Z401 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
DENND4AQ7Z401 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
DENND4AQ7Z401 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
DENND4AQ7Z401 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC15.74■□□□□ 0.11
DENND4AQ7Z401 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC15.74■□□□□ 0.11
DENND4AQ7Z401 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
DENND4AQ7Z401 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
DENND4AQ7Z401 HLA-J-204ENST00000495278 958 ntBASIC15.74■□□□□ 0.11
DENND4AQ7Z401 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.74■□□□□ 0.11
DENND4AQ7Z401 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC15.74■□□□□ 0.11
DENND4AQ7Z401 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
DENND4AQ7Z401 EID1-202ENST00000560490 584 ntTSL 3 BASIC15.74■□□□□ 0.11
DENND4AQ7Z401 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.74■□□□□ 0.11
DENND4AQ7Z401 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
DENND4AQ7Z401 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
DENND4AQ7Z401 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
DENND4AQ7Z401 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
DENND4AQ7Z401 PCDHB19P-201ENST00000570871 2371 ntBASIC15.73■□□□□ 0.11
DENND4AQ7Z401 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
DENND4AQ7Z401 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
DENND4AQ7Z401 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
DENND4AQ7Z401 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
DENND4AQ7Z401 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
DENND4AQ7Z401 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC15.73■□□□□ 0.11
DENND4AQ7Z401 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC15.73■□□□□ 0.11
DENND4AQ7Z401 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
DENND4AQ7Z401 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
DENND4AQ7Z401 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.73■□□□□ 0.11
DENND4AQ7Z401 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
DENND4AQ7Z401 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
DENND4AQ7Z401 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
DENND4AQ7Z401 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
DENND4AQ7Z401 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
DENND4AQ7Z401 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
DENND4AQ7Z401 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.73■□□□□ 0.11
DENND4AQ7Z401 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.73■□□□□ 0.11
DENND4AQ7Z401 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
DENND4AQ7Z401 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
DENND4AQ7Z401 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC15.73■□□□□ 0.11
DENND4AQ7Z401 LBH-202ENST00000401506 485 ntTSL 3 BASIC15.73■□□□□ 0.11
DENND4AQ7Z401 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC15.73■□□□□ 0.11
DENND4AQ7Z401 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC15.73■□□□□ 0.11
DENND4AQ7Z401 AL355334.1-201ENST00000417713 215 ntBASIC15.73■□□□□ 0.11
DENND4AQ7Z401 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
DENND4AQ7Z401 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC15.73■□□□□ 0.11
DENND4AQ7Z401 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
DENND4AQ7Z401 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
DENND4AQ7Z401 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
DENND4AQ7Z401 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.73■□□□□ 0.11
DENND4AQ7Z401 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.73■□□□□ 0.11
DENND4AQ7Z401 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
DENND4AQ7Z401 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.73■□□□□ 0.11
DENND4AQ7Z401 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
DENND4AQ7Z401 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
DENND4AQ7Z401 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.72■□□□□ 0.11
DENND4AQ7Z401 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
DENND4AQ7Z401 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.72■□□□□ 0.11
DENND4AQ7Z401 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC15.72■□□□□ 0.11
DENND4AQ7Z401 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.72■□□□□ 0.11
DENND4AQ7Z401 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
DENND4AQ7Z401 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.72■□□□□ 0.11
DENND4AQ7Z401 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
DENND4AQ7Z401 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC15.72■□□□□ 0.11
DENND4AQ7Z401 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
DENND4AQ7Z401 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
DENND4AQ7Z401 AC104784.1-201ENST00000473096 294 ntBASIC15.72■□□□□ 0.11
DENND4AQ7Z401 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
DENND4AQ7Z401 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC15.72■□□□□ 0.11
DENND4AQ7Z401 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.72■□□□□ 0.11
DENND4AQ7Z401 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
DENND4AQ7Z401 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
DENND4AQ7Z401 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
DENND4AQ7Z401 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
DENND4AQ7Z401 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.72■□□□□ 0.11
DENND4AQ7Z401 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
DENND4AQ7Z401 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
DENND4AQ7Z401 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
DENND4AQ7Z401 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.72■□□□□ 0.11
DENND4AQ7Z401 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
DENND4AQ7Z401 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
DENND4AQ7Z401 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
DENND4AQ7Z401 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
DENND4AQ7Z401 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms