Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC19.37■□□□□ 0.69
UBE3BQ7Z3V4 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC19.37■□□□□ 0.69
UBE3BQ7Z3V4 BX539320.1-201ENST00000623759 877 ntBASIC19.37■□□□□ 0.69
UBE3BQ7Z3V4 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC19.37■□□□□ 0.69
UBE3BQ7Z3V4 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBE3BQ7Z3V4 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC19.37■□□□□ 0.69
UBE3BQ7Z3V4 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
UBE3BQ7Z3V4 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC19.37■□□□□ 0.69
UBE3BQ7Z3V4 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBE3BQ7Z3V4 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
UBE3BQ7Z3V4 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC19.37■□□□□ 0.69
UBE3BQ7Z3V4 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC19.36■□□□□ 0.69
UBE3BQ7Z3V4 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBE3BQ7Z3V4 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
UBE3BQ7Z3V4 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
UBE3BQ7Z3V4 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
UBE3BQ7Z3V4 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC19.36■□□□□ 0.69
UBE3BQ7Z3V4 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
UBE3BQ7Z3V4 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
UBE3BQ7Z3V4 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBE3BQ7Z3V4 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC19.36■□□□□ 0.69
UBE3BQ7Z3V4 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBE3BQ7Z3V4 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
UBE3BQ7Z3V4 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBE3BQ7Z3V4 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC19.36■□□□□ 0.69
UBE3BQ7Z3V4 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC19.36■□□□□ 0.69
UBE3BQ7Z3V4 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBE3BQ7Z3V4 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
UBE3BQ7Z3V4 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBE3BQ7Z3V4 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC19.36■□□□□ 0.69
UBE3BQ7Z3V4 STX1A-203ENST00000395155 783 ntTSL 2 BASIC19.36■□□□□ 0.69
UBE3BQ7Z3V4 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC19.36■□□□□ 0.69
UBE3BQ7Z3V4 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
UBE3BQ7Z3V4 RPL7P3-201ENST00000441388 714 ntBASIC19.36■□□□□ 0.69
UBE3BQ7Z3V4 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC19.36■□□□□ 0.69
UBE3BQ7Z3V4 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC19.36■□□□□ 0.69
UBE3BQ7Z3V4 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC19.36■□□□□ 0.69
UBE3BQ7Z3V4 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC19.36■□□□□ 0.69
UBE3BQ7Z3V4 AP005019.2-201ENST00000615104 511 ntBASIC19.36■□□□□ 0.69
UBE3BQ7Z3V4 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC19.36■□□□□ 0.69
UBE3BQ7Z3V4 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC19.36■□□□□ 0.69
UBE3BQ7Z3V4 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
UBE3BQ7Z3V4 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC19.36■□□□□ 0.69
UBE3BQ7Z3V4 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
UBE3BQ7Z3V4 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
UBE3BQ7Z3V4 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBE3BQ7Z3V4 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
UBE3BQ7Z3V4 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC19.36■□□□□ 0.69
UBE3BQ7Z3V4 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBE3BQ7Z3V4 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC19.36■□□□□ 0.69
UBE3BQ7Z3V4 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBE3BQ7Z3V4 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBE3BQ7Z3V4 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC19.36■□□□□ 0.69
UBE3BQ7Z3V4 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
UBE3BQ7Z3V4 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC19.36■□□□□ 0.69
UBE3BQ7Z3V4 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBE3BQ7Z3V4 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
UBE3BQ7Z3V4 AC105250.1-201ENST00000509378 2057 ntBASIC19.36■□□□□ 0.69
UBE3BQ7Z3V4 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
UBE3BQ7Z3V4 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
UBE3BQ7Z3V4 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC19.35■□□□□ 0.69
UBE3BQ7Z3V4 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBE3BQ7Z3V4 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBE3BQ7Z3V4 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBE3BQ7Z3V4 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBE3BQ7Z3V4 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
UBE3BQ7Z3V4 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBE3BQ7Z3V4 RNU1-114P-201ENST00000365297 166 ntBASIC19.35■□□□□ 0.69
UBE3BQ7Z3V4 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC19.35■□□□□ 0.69
UBE3BQ7Z3V4 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBE3BQ7Z3V4 AC099336.1-201ENST00000417053 1171 ntBASIC19.35■□□□□ 0.69
UBE3BQ7Z3V4 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBE3BQ7Z3V4 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC19.35■□□□□ 0.69
UBE3BQ7Z3V4 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC19.35■□□□□ 0.69
UBE3BQ7Z3V4 AP000812.2-201ENST00000538934 718 ntBASIC19.35■□□□□ 0.69
UBE3BQ7Z3V4 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC19.35■□□□□ 0.69
UBE3BQ7Z3V4 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC19.35■□□□□ 0.69
UBE3BQ7Z3V4 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
UBE3BQ7Z3V4 AL033527.4-201ENST00000641026 673 ntBASIC19.35■□□□□ 0.69
UBE3BQ7Z3V4 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBE3BQ7Z3V4 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBE3BQ7Z3V4 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
UBE3BQ7Z3V4 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
UBE3BQ7Z3V4 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
UBE3BQ7Z3V4 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC19.35■□□□□ 0.69
UBE3BQ7Z3V4 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBE3BQ7Z3V4 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
UBE3BQ7Z3V4 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
UBE3BQ7Z3V4 WARS-232ENST00000556645 2508 ntTSL 5 BASIC19.34■□□□□ 0.69
UBE3BQ7Z3V4 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
UBE3BQ7Z3V4 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC19.34■□□□□ 0.69
UBE3BQ7Z3V4 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
UBE3BQ7Z3V4 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBE3BQ7Z3V4 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBE3BQ7Z3V4 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBE3BQ7Z3V4 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
UBE3BQ7Z3V4 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBE3BQ7Z3V4 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC19.34■□□□□ 0.69
UBE3BQ7Z3V4 ZBTB12BP-201ENST00000314232 1122 ntBASIC19.34■□□□□ 0.69
UBE3BQ7Z3V4 PGGT1BP2-201ENST00000398621 1028 ntBASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms