Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC13.76□□□□□ -0.21
C11orf88Q6PI97 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
C11orf88Q6PI97 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
C11orf88Q6PI97 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
C11orf88Q6PI97 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
C11orf88Q6PI97 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
C11orf88Q6PI97 AC073621.1-201ENST00000392730 636 ntBASIC13.76□□□□□ -0.21
C11orf88Q6PI97 PMP22-202ENST00000395936 816 ntTSL 3 BASIC13.76□□□□□ -0.21
C11orf88Q6PI97 LINC00982-205ENST00000420957 435 ntBASIC13.76□□□□□ -0.21
C11orf88Q6PI97 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC13.76□□□□□ -0.21
C11orf88Q6PI97 PRSS29P-201ENST00000440800 595 ntBASIC13.76□□□□□ -0.21
C11orf88Q6PI97 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC13.76□□□□□ -0.21
C11orf88Q6PI97 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC13.76□□□□□ -0.21
C11orf88Q6PI97 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC13.76□□□□□ -0.21
C11orf88Q6PI97 CYGB-205ENST00000590175 830 ntTSL 3 BASIC13.76□□□□□ -0.21
C11orf88Q6PI97 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC13.76□□□□□ -0.21
C11orf88Q6PI97 SIGLEC29P-201ENST00000599873 1114 ntBASIC13.76□□□□□ -0.21
C11orf88Q6PI97 AL139424.1-201ENST00000607572 797 ntBASIC13.76□□□□□ -0.21
C11orf88Q6PI97 AC020765.3-201ENST00000613051 740 ntBASIC13.76□□□□□ -0.21
C11orf88Q6PI97 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
C11orf88Q6PI97 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
C11orf88Q6PI97 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
C11orf88Q6PI97 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
C11orf88Q6PI97 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
C11orf88Q6PI97 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
C11orf88Q6PI97 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
C11orf88Q6PI97 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
C11orf88Q6PI97 PID1-202ENST00000392054 2745 ntTSL 2 BASIC13.76□□□□□ -0.21
C11orf88Q6PI97 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.76□□□□□ -0.21
C11orf88Q6PI97 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
C11orf88Q6PI97 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
C11orf88Q6PI97 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
C11orf88Q6PI97 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
C11orf88Q6PI97 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
C11orf88Q6PI97 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
C11orf88Q6PI97 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
C11orf88Q6PI97 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
C11orf88Q6PI97 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.75□□□□□ -0.21
C11orf88Q6PI97 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
C11orf88Q6PI97 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
C11orf88Q6PI97 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
C11orf88Q6PI97 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
C11orf88Q6PI97 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC13.75□□□□□ -0.21
C11orf88Q6PI97 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
C11orf88Q6PI97 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
C11orf88Q6PI97 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
C11orf88Q6PI97 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
C11orf88Q6PI97 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
C11orf88Q6PI97 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
C11orf88Q6PI97 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
C11orf88Q6PI97 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
C11orf88Q6PI97 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
C11orf88Q6PI97 CENPM-204ENST00000402420 688 ntTSL 5 BASIC13.75□□□□□ -0.21
C11orf88Q6PI97 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC13.75□□□□□ -0.21
C11orf88Q6PI97 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC13.75□□□□□ -0.21
C11orf88Q6PI97 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC13.75□□□□□ -0.21
C11orf88Q6PI97 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
C11orf88Q6PI97 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC13.75□□□□□ -0.21
C11orf88Q6PI97 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC13.75□□□□□ -0.21
C11orf88Q6PI97 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC13.75□□□□□ -0.21
C11orf88Q6PI97 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC13.75□□□□□ -0.21
C11orf88Q6PI97 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC13.75□□□□□ -0.21
C11orf88Q6PI97 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC13.75□□□□□ -0.21
C11orf88Q6PI97 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
C11orf88Q6PI97 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC13.75□□□□□ -0.21
C11orf88Q6PI97 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
C11orf88Q6PI97 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
C11orf88Q6PI97 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.75□□□□□ -0.21
C11orf88Q6PI97 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
C11orf88Q6PI97 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.75□□□□□ -0.21
C11orf88Q6PI97 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
C11orf88Q6PI97 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
C11orf88Q6PI97 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
C11orf88Q6PI97 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.75□□□□□ -0.21
C11orf88Q6PI97 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
C11orf88Q6PI97 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.75□□□□□ -0.21
C11orf88Q6PI97 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
C11orf88Q6PI97 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC13.75□□□□□ -0.21
C11orf88Q6PI97 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
C11orf88Q6PI97 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
C11orf88Q6PI97 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.75□□□□□ -0.21
C11orf88Q6PI97 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
C11orf88Q6PI97 AC092919.2-201ENST00000623631 1645 ntBASIC13.75□□□□□ -0.21
C11orf88Q6PI97 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
C11orf88Q6PI97 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC13.75□□□□□ -0.21
C11orf88Q6PI97 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.75□□□□□ -0.21
C11orf88Q6PI97 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
C11orf88Q6PI97 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
C11orf88Q6PI97 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC13.74□□□□□ -0.21
C11orf88Q6PI97 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
C11orf88Q6PI97 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
C11orf88Q6PI97 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
C11orf88Q6PI97 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
C11orf88Q6PI97 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
C11orf88Q6PI97 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
C11orf88Q6PI97 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
C11orf88Q6PI97 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.74□□□□□ -0.21
C11orf88Q6PI97 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
C11orf88Q6PI97 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
C11orf88Q6PI97 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms