Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC16.58■□□□□ 0.24
CNKSR3Q6P9H4 SPCS2P2-201ENST00000603270 608 ntBASIC16.58■□□□□ 0.24
CNKSR3Q6P9H4 AC022748.3-201ENST00000621828 275 ntBASIC16.58■□□□□ 0.24
CNKSR3Q6P9H4 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC16.58■□□□□ 0.24
CNKSR3Q6P9H4 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CNKSR3Q6P9H4 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC16.58■□□□□ 0.24
CNKSR3Q6P9H4 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC16.58■□□□□ 0.24
CNKSR3Q6P9H4 AC084364.1-201ENST00000551967 1556 ntBASIC16.58■□□□□ 0.24
CNKSR3Q6P9H4 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CNKSR3Q6P9H4 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CNKSR3Q6P9H4 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.58■□□□□ 0.24
CNKSR3Q6P9H4 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CNKSR3Q6P9H4 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CNKSR3Q6P9H4 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CNKSR3Q6P9H4 AC022211.2-201ENST00000585075 2527 ntBASIC16.58■□□□□ 0.24
CNKSR3Q6P9H4 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CNKSR3Q6P9H4 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CNKSR3Q6P9H4 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.58■□□□□ 0.24
CNKSR3Q6P9H4 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.58■□□□□ 0.24
CNKSR3Q6P9H4 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CNKSR3Q6P9H4 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CNKSR3Q6P9H4 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CNKSR3Q6P9H4 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.57■□□□□ 0.24
CNKSR3Q6P9H4 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CNKSR3Q6P9H4 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CNKSR3Q6P9H4 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CNKSR3Q6P9H4 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CNKSR3Q6P9H4 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CNKSR3Q6P9H4 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CNKSR3Q6P9H4 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.57■□□□□ 0.24
CNKSR3Q6P9H4 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC16.57■□□□□ 0.24
CNKSR3Q6P9H4 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC16.57■□□□□ 0.24
CNKSR3Q6P9H4 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CNKSR3Q6P9H4 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CNKSR3Q6P9H4 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CNKSR3Q6P9H4 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CNKSR3Q6P9H4 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
CNKSR3Q6P9H4 DPM3-202ENST00000368399 517 ntBASIC16.57■□□□□ 0.24
CNKSR3Q6P9H4 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC16.57■□□□□ 0.24
CNKSR3Q6P9H4 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
CNKSR3Q6P9H4 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CNKSR3Q6P9H4 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CNKSR3Q6P9H4 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CNKSR3Q6P9H4 MSRA-203ENST00000441698 788 ntTSL 2 BASIC16.57■□□□□ 0.24
CNKSR3Q6P9H4 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC16.57■□□□□ 0.24
CNKSR3Q6P9H4 FTLP10-202ENST00000505798 471 ntBASIC16.57■□□□□ 0.24
CNKSR3Q6P9H4 AC106794.1-201ENST00000506935 792 ntBASIC16.57■□□□□ 0.24
CNKSR3Q6P9H4 AC134698.3-201ENST00000523880 214 ntBASIC16.57■□□□□ 0.24
CNKSR3Q6P9H4 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC16.57■□□□□ 0.24
CNKSR3Q6P9H4 MIR3907-201ENST00000579424 151 ntBASIC16.57■□□□□ 0.24
CNKSR3Q6P9H4 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC16.57■□□□□ 0.24
CNKSR3Q6P9H4 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC16.57■□□□□ 0.24
CNKSR3Q6P9H4 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CNKSR3Q6P9H4 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CNKSR3Q6P9H4 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CNKSR3Q6P9H4 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CNKSR3Q6P9H4 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CNKSR3Q6P9H4 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CNKSR3Q6P9H4 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CNKSR3Q6P9H4 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.57■□□□□ 0.24
CNKSR3Q6P9H4 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
CNKSR3Q6P9H4 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CNKSR3Q6P9H4 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC16.56■□□□□ 0.24
CNKSR3Q6P9H4 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CNKSR3Q6P9H4 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CNKSR3Q6P9H4 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CNKSR3Q6P9H4 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CNKSR3Q6P9H4 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CNKSR3Q6P9H4 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CNKSR3Q6P9H4 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
CNKSR3Q6P9H4 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CNKSR3Q6P9H4 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CNKSR3Q6P9H4 AC008132.1-202ENST00000342005 1389 ntBASIC16.56■□□□□ 0.24
CNKSR3Q6P9H4 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
CNKSR3Q6P9H4 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CNKSR3Q6P9H4 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC16.56■□□□□ 0.24
CNKSR3Q6P9H4 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.56■□□□□ 0.24
CNKSR3Q6P9H4 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CNKSR3Q6P9H4 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CNKSR3Q6P9H4 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CNKSR3Q6P9H4 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CNKSR3Q6P9H4 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CNKSR3Q6P9H4 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CNKSR3Q6P9H4 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CNKSR3Q6P9H4 MIR33B-201ENST00000385104 96 ntBASIC16.56■□□□□ 0.24
CNKSR3Q6P9H4 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CNKSR3Q6P9H4 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC16.56■□□□□ 0.24
CNKSR3Q6P9H4 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CNKSR3Q6P9H4 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CNKSR3Q6P9H4 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC16.56■□□□□ 0.24
CNKSR3Q6P9H4 FTLP1-201ENST00000449155 526 ntBASIC16.56■□□□□ 0.24
CNKSR3Q6P9H4 AC024681.1-201ENST00000521917 487 ntBASIC16.56■□□□□ 0.24
CNKSR3Q6P9H4 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CNKSR3Q6P9H4 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC16.56■□□□□ 0.24
CNKSR3Q6P9H4 AC013355.1-201ENST00000562625 723 ntBASIC16.56■□□□□ 0.24
CNKSR3Q6P9H4 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC16.56■□□□□ 0.24
CNKSR3Q6P9H4 AC138466.3-201ENST00000619983 221 ntBASIC16.56■□□□□ 0.24
CNKSR3Q6P9H4 AL353726.2-201ENST00000623259 884 ntBASIC16.56■□□□□ 0.24
CNKSR3Q6P9H4 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CNKSR3Q6P9H4 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms