Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC62Q6P9F0 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC62Q6P9F0 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC62Q6P9F0 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CCDC62Q6P9F0 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC62Q6P9F0 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC62Q6P9F0 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC62Q6P9F0 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC62Q6P9F0 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC62Q6P9F0 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC17.52■□□□□ 0.4
CCDC62Q6P9F0 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
CCDC62Q6P9F0 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC62Q6P9F0 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC62Q6P9F0 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC62Q6P9F0 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC62Q6P9F0 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC62Q6P9F0 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CCDC62Q6P9F0 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC62Q6P9F0 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.52■□□□□ 0.4
CCDC62Q6P9F0 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC62Q6P9F0 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CCDC62Q6P9F0 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC62Q6P9F0 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC62Q6P9F0 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.52■□□□□ 0.4
CCDC62Q6P9F0 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC62Q6P9F0 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC17.52■□□□□ 0.4
CCDC62Q6P9F0 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC62Q6P9F0 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
CCDC62Q6P9F0 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC62Q6P9F0 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CCDC62Q6P9F0 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC62Q6P9F0 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC62Q6P9F0 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC17.52■□□□□ 0.4
CCDC62Q6P9F0 KRT90P-201ENST00000549264 1064 ntBASIC17.52■□□□□ 0.4
CCDC62Q6P9F0 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC17.52■□□□□ 0.4
CCDC62Q6P9F0 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC17.52■□□□□ 0.4
CCDC62Q6P9F0 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC17.52■□□□□ 0.4
CCDC62Q6P9F0 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC17.52■□□□□ 0.4
CCDC62Q6P9F0 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
CCDC62Q6P9F0 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.52■□□□□ 0.4
CCDC62Q6P9F0 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC62Q6P9F0 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC62Q6P9F0 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC62Q6P9F0 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.52■□□□□ 0.39
CCDC62Q6P9F0 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.39
CCDC62Q6P9F0 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.52■□□□□ 0.39
CCDC62Q6P9F0 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC62Q6P9F0 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC62Q6P9F0 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC62Q6P9F0 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
CCDC62Q6P9F0 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC62Q6P9F0 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC62Q6P9F0 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC62Q6P9F0 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC62Q6P9F0 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC62Q6P9F0 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC62Q6P9F0 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC62Q6P9F0 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC62Q6P9F0 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC62Q6P9F0 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC62Q6P9F0 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CCDC62Q6P9F0 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC17.51■□□□□ 0.39
CCDC62Q6P9F0 AC026954.1-201ENST00000429771 1293 ntBASIC17.51■□□□□ 0.39
CCDC62Q6P9F0 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
CCDC62Q6P9F0 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CCDC62Q6P9F0 AP001582.1-201ENST00000525856 295 ntBASIC17.51■□□□□ 0.39
CCDC62Q6P9F0 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC17.51■□□□□ 0.39
CCDC62Q6P9F0 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC62Q6P9F0 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC62Q6P9F0 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC62Q6P9F0 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC17.51■□□□□ 0.39
CCDC62Q6P9F0 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC62Q6P9F0 AL138799.1-201ENST00000448213 1675 ntBASIC17.51■□□□□ 0.39
CCDC62Q6P9F0 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC62Q6P9F0 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC62Q6P9F0 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CCDC62Q6P9F0 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC62Q6P9F0 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.51■□□□□ 0.39
CCDC62Q6P9F0 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.51■□□□□ 0.39
CCDC62Q6P9F0 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC62Q6P9F0 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC62Q6P9F0 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC62Q6P9F0 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC62Q6P9F0 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
CCDC62Q6P9F0 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC62Q6P9F0 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC62Q6P9F0 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC62Q6P9F0 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC62Q6P9F0 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.5■□□□□ 0.39
CCDC62Q6P9F0 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC62Q6P9F0 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC62Q6P9F0 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC62Q6P9F0 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
CCDC62Q6P9F0 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CCDC62Q6P9F0 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.5■□□□□ 0.39
CCDC62Q6P9F0 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC62Q6P9F0 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
CCDC62Q6P9F0 PGGT1BP2-201ENST00000398621 1028 ntBASIC17.5■□□□□ 0.39
CCDC62Q6P9F0 CNN2P8-201ENST00000421872 913 ntBASIC17.5■□□□□ 0.39
CCDC62Q6P9F0 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms