Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 AC022145.2-201ENST00000598203 171 ntBASIC16.02■□□□□ 0.16
CASC4Q6P4E1 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CASC4Q6P4E1 AC105339.1-204ENST00000636249 355 ntBASIC16.02■□□□□ 0.16
CASC4Q6P4E1 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
CASC4Q6P4E1 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
CASC4Q6P4E1 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CASC4Q6P4E1 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
CASC4Q6P4E1 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CASC4Q6P4E1 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CASC4Q6P4E1 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
CASC4Q6P4E1 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.02■□□□□ 0.15
CASC4Q6P4E1 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.02■□□□□ 0.15
CASC4Q6P4E1 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CASC4Q6P4E1 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.01■□□□□ 0.15
CASC4Q6P4E1 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.01■□□□□ 0.15
CASC4Q6P4E1 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.01■□□□□ 0.15
CASC4Q6P4E1 AC067750.1-201ENST00000608826 6545 ntBASIC16.01■□□□□ 0.15
CASC4Q6P4E1 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CASC4Q6P4E1 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CASC4Q6P4E1 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CASC4Q6P4E1 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CASC4Q6P4E1 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CASC4Q6P4E1 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.01■□□□□ 0.15
CASC4Q6P4E1 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.01■□□□□ 0.15
CASC4Q6P4E1 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CASC4Q6P4E1 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CASC4Q6P4E1 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.01■□□□□ 0.15
CASC4Q6P4E1 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CASC4Q6P4E1 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.01■□□□□ 0.15
CASC4Q6P4E1 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CASC4Q6P4E1 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CASC4Q6P4E1 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CASC4Q6P4E1 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CASC4Q6P4E1 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CASC4Q6P4E1 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CASC4Q6P4E1 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CASC4Q6P4E1 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CASC4Q6P4E1 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CASC4Q6P4E1 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.01■□□□□ 0.15
CASC4Q6P4E1 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.01■□□□□ 0.15
CASC4Q6P4E1 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.01■□□□□ 0.15
CASC4Q6P4E1 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
CASC4Q6P4E1 DNAJB3-201ENST00000446806 729 ntBASIC16.01■□□□□ 0.15
CASC4Q6P4E1 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.01■□□□□ 0.15
CASC4Q6P4E1 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.01■□□□□ 0.15
CASC4Q6P4E1 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.01■□□□□ 0.15
CASC4Q6P4E1 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.01■□□□□ 0.15
CASC4Q6P4E1 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.01■□□□□ 0.15
CASC4Q6P4E1 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.01■□□□□ 0.15
CASC4Q6P4E1 AC084121.4-201ENST00000641598 221 ntBASIC16.01■□□□□ 0.15
CASC4Q6P4E1 AF228730.8-201ENST00000642140 221 ntBASIC16.01■□□□□ 0.15
CASC4Q6P4E1 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.01■□□□□ 0.15
CASC4Q6P4E1 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.01■□□□□ 0.15
CASC4Q6P4E1 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CASC4Q6P4E1 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CASC4Q6P4E1 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CASC4Q6P4E1 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CASC4Q6P4E1 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.01■□□□□ 0.15
CASC4Q6P4E1 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CASC4Q6P4E1 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
CASC4Q6P4E1 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CASC4Q6P4E1 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.01■□□□□ 0.15
CASC4Q6P4E1 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CASC4Q6P4E1 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CASC4Q6P4E1 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CASC4Q6P4E1 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.01■□□□□ 0.15
CASC4Q6P4E1 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CASC4Q6P4E1 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC16■□□□□ 0.15
CASC4Q6P4E1 TCAF2P1-201ENST00000291129 2421 ntBASIC16■□□□□ 0.15
CASC4Q6P4E1 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CASC4Q6P4E1 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CASC4Q6P4E1 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
CASC4Q6P4E1 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16■□□□□ 0.15
CASC4Q6P4E1 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16■□□□□ 0.15
CASC4Q6P4E1 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CASC4Q6P4E1 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
CASC4Q6P4E1 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CASC4Q6P4E1 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CASC4Q6P4E1 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16■□□□□ 0.15
CASC4Q6P4E1 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CASC4Q6P4E1 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
CASC4Q6P4E1 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC16■□□□□ 0.15
CASC4Q6P4E1 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CASC4Q6P4E1 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CASC4Q6P4E1 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CASC4Q6P4E1 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16■□□□□ 0.15
CASC4Q6P4E1 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
CASC4Q6P4E1 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16■□□□□ 0.15
CASC4Q6P4E1 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16■□□□□ 0.15
CASC4Q6P4E1 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16■□□□□ 0.15
CASC4Q6P4E1 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16■□□□□ 0.15
CASC4Q6P4E1 ALG1L8P-201ENST00000533887 760 ntBASIC16■□□□□ 0.15
CASC4Q6P4E1 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16■□□□□ 0.15
CASC4Q6P4E1 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
CASC4Q6P4E1 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16■□□□□ 0.15
CASC4Q6P4E1 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
CASC4Q6P4E1 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CASC4Q6P4E1 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16■□□□□ 0.15
CASC4Q6P4E1 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16■□□□□ 0.15
CASC4Q6P4E1 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms