Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.3□□□□□ -0.28
LRRK2Q5S007 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LRRK2Q5S007 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
LRRK2Q5S007 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
LRRK2Q5S007 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC13.3□□□□□ -0.28
LRRK2Q5S007 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LRRK2Q5S007 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LRRK2Q5S007 RNF216P1-203ENST00000404404 2427 ntBASIC13.3□□□□□ -0.28
LRRK2Q5S007 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LRRK2Q5S007 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.3□□□□□ -0.28
LRRK2Q5S007 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC13.3□□□□□ -0.28
LRRK2Q5S007 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
LRRK2Q5S007 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LRRK2Q5S007 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LRRK2Q5S007 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LRRK2Q5S007 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.3□□□□□ -0.28
LRRK2Q5S007 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LRRK2Q5S007 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LRRK2Q5S007 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC13.3□□□□□ -0.28
LRRK2Q5S007 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC13.3□□□□□ -0.28
LRRK2Q5S007 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC13.3□□□□□ -0.28
LRRK2Q5S007 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC13.3□□□□□ -0.28
LRRK2Q5S007 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC13.3□□□□□ -0.28
LRRK2Q5S007 AC024293.1-201ENST00000467930 498 ntBASIC13.3□□□□□ -0.28
LRRK2Q5S007 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.3□□□□□ -0.28
LRRK2Q5S007 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC13.3□□□□□ -0.28
LRRK2Q5S007 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC13.3□□□□□ -0.28
LRRK2Q5S007 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
LRRK2Q5S007 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LRRK2Q5S007 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC13.3□□□□□ -0.28
LRRK2Q5S007 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC13.3□□□□□ -0.28
LRRK2Q5S007 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC13.3□□□□□ -0.28
LRRK2Q5S007 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LRRK2Q5S007 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC13.3□□□□□ -0.28
LRRK2Q5S007 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
LRRK2Q5S007 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LRRK2Q5S007 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.3□□□□□ -0.28
LRRK2Q5S007 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
LRRK2Q5S007 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LRRK2Q5S007 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
LRRK2Q5S007 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LRRK2Q5S007 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LRRK2Q5S007 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
LRRK2Q5S007 MIR557-201ENST00000385239 98 ntBASIC13.3□□□□□ -0.28
LRRK2Q5S007 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LRRK2Q5S007 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC13.3□□□□□ -0.28
LRRK2Q5S007 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC13.3□□□□□ -0.28
LRRK2Q5S007 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LRRK2Q5S007 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC13.3□□□□□ -0.28
LRRK2Q5S007 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LRRK2Q5S007 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LRRK2Q5S007 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC13.3□□□□□ -0.28
LRRK2Q5S007 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC13.3□□□□□ -0.28
LRRK2Q5S007 AC097359.3-201ENST00000603982 1210 ntBASIC13.3□□□□□ -0.28
LRRK2Q5S007 NAMA-206ENST00000605377 509 ntTSL 5 BASIC13.3□□□□□ -0.28
LRRK2Q5S007 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
LRRK2Q5S007 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LRRK2Q5S007 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
LRRK2Q5S007 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LRRK2Q5S007 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LRRK2Q5S007 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
LRRK2Q5S007 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
LRRK2Q5S007 LINC01815-202ENST00000641468 1409 ntBASIC13.29□□□□□ -0.28
LRRK2Q5S007 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
LRRK2Q5S007 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.29□□□□□ -0.28
LRRK2Q5S007 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LRRK2Q5S007 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
LRRK2Q5S007 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LRRK2Q5S007 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
LRRK2Q5S007 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LRRK2Q5S007 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LRRK2Q5S007 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.29□□□□□ -0.28
LRRK2Q5S007 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC13.29□□□□□ -0.28
LRRK2Q5S007 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC13.29□□□□□ -0.28
LRRK2Q5S007 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC13.29□□□□□ -0.28
LRRK2Q5S007 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC13.29□□□□□ -0.28
LRRK2Q5S007 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC13.29□□□□□ -0.28
LRRK2Q5S007 AC004686.1-201ENST00000605113 538 ntBASIC13.29□□□□□ -0.28
LRRK2Q5S007 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.29□□□□□ -0.28
LRRK2Q5S007 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.29□□□□□ -0.28
LRRK2Q5S007 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LRRK2Q5S007 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LRRK2Q5S007 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
LRRK2Q5S007 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC13.29□□□□□ -0.28
LRRK2Q5S007 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LRRK2Q5S007 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LRRK2Q5S007 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
LRRK2Q5S007 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC13.29□□□□□ -0.28
LRRK2Q5S007 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LRRK2Q5S007 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LRRK2Q5S007 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LRRK2Q5S007 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LRRK2Q5S007 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LRRK2Q5S007 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
LRRK2Q5S007 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LRRK2Q5S007 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC13.29□□□□□ -0.28
LRRK2Q5S007 AC007613.1-201ENST00000572811 2597 ntBASIC13.29□□□□□ -0.28
LRRK2Q5S007 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LRRK2Q5S007 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
LRRK2Q5S007 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms