Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
NKX6-1P78426 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
NKX6-1P78426 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
NKX6-1P78426 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.87□□□□□ -0.19
NKX6-1P78426 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NKX6-1P78426 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NKX6-1P78426 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
NKX6-1P78426 RPL28-204ENST00000431533 590 ntTSL 2 BASIC13.87□□□□□ -0.19
NKX6-1P78426 TTTY23B-201ENST00000442790 549 ntBASIC13.87□□□□□ -0.19
NKX6-1P78426 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NKX6-1P78426 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.87□□□□□ -0.19
NKX6-1P78426 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC13.87□□□□□ -0.19
NKX6-1P78426 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC13.87□□□□□ -0.19
NKX6-1P78426 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NKX6-1P78426 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
NKX6-1P78426 AC092658.1-201ENST00000505836 891 ntBASIC13.87□□□□□ -0.19
NKX6-1P78426 ZNF890P-202ENST00000530367 1156 ntBASIC13.87□□□□□ -0.19
NKX6-1P78426 NOP2-211ENST00000540228 668 ntTSL 2 BASIC13.87□□□□□ -0.19
NKX6-1P78426 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC13.87□□□□□ -0.19
NKX6-1P78426 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC13.87□□□□□ -0.19
NKX6-1P78426 RPL28-206ENST00000558752 671 ntTSL 3 BASIC13.87□□□□□ -0.19
NKX6-1P78426 APOC4-201ENST00000591600 348 ntTSL 3 BASIC13.87□□□□□ -0.19
NKX6-1P78426 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NKX6-1P78426 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NKX6-1P78426 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC13.87□□□□□ -0.19
NKX6-1P78426 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NKX6-1P78426 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NKX6-1P78426 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC13.87□□□□□ -0.19
NKX6-1P78426 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NKX6-1P78426 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NKX6-1P78426 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
NKX6-1P78426 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC13.87□□□□□ -0.19
NKX6-1P78426 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
NKX6-1P78426 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
NKX6-1P78426 CYP4F24P-201ENST00000586049 1580 ntBASIC13.87□□□□□ -0.19
NKX6-1P78426 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NKX6-1P78426 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
NKX6-1P78426 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NKX6-1P78426 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.87□□□□□ -0.19
NKX6-1P78426 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
NKX6-1P78426 AC024909.3-201ENST00000611513 2257 ntBASIC13.87□□□□□ -0.19
NKX6-1P78426 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC13.87□□□□□ -0.19
NKX6-1P78426 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
NKX6-1P78426 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
NKX6-1P78426 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NKX6-1P78426 PAUPAR-201ENST00000630360 2965 ntBASIC13.86□□□□□ -0.19
NKX6-1P78426 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
NKX6-1P78426 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC13.86□□□□□ -0.19
NKX6-1P78426 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NKX6-1P78426 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC13.86□□□□□ -0.19
NKX6-1P78426 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC13.86□□□□□ -0.19
NKX6-1P78426 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
NKX6-1P78426 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NKX6-1P78426 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC13.86□□□□□ -0.19
NKX6-1P78426 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NKX6-1P78426 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NKX6-1P78426 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NKX6-1P78426 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NKX6-1P78426 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC13.86□□□□□ -0.19
NKX6-1P78426 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NKX6-1P78426 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NKX6-1P78426 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
NKX6-1P78426 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NKX6-1P78426 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC13.86□□□□□ -0.19
NKX6-1P78426 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.86□□□□□ -0.19
NKX6-1P78426 AC022210.1-201ENST00000449856 793 ntBASIC13.86□□□□□ -0.19
NKX6-1P78426 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NKX6-1P78426 WASH4P-201ENST00000564273 1246 ntBASIC13.86□□□□□ -0.19
NKX6-1P78426 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.86□□□□□ -0.19
NKX6-1P78426 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC13.86□□□□□ -0.19
NKX6-1P78426 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
NKX6-1P78426 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC13.86□□□□□ -0.19
NKX6-1P78426 AL691432.1-201ENST00000596308 1422 ntBASIC13.86□□□□□ -0.19
NKX6-1P78426 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC13.86□□□□□ -0.19
NKX6-1P78426 AC138969.2-201ENST00000532739 9932 ntBASIC13.86□□□□□ -0.19
NKX6-1P78426 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NKX6-1P78426 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NKX6-1P78426 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NKX6-1P78426 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NKX6-1P78426 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC13.86□□□□□ -0.19
NKX6-1P78426 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13.86□□□□□ -0.19
NKX6-1P78426 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NKX6-1P78426 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC13.86□□□□□ -0.19
NKX6-1P78426 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NKX6-1P78426 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
NKX6-1P78426 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NKX6-1P78426 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NKX6-1P78426 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
NKX6-1P78426 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NKX6-1P78426 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.85□□□□□ -0.19
NKX6-1P78426 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.85□□□□□ -0.19
NKX6-1P78426 AL513523.2-202ENST00000427283 2040 ntBASIC13.85□□□□□ -0.19
NKX6-1P78426 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC13.85□□□□□ -0.19
NKX6-1P78426 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NKX6-1P78426 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
NKX6-1P78426 MTHFR-217ENST00000641820 1569 ntBASIC13.85□□□□□ -0.19
NKX6-1P78426 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NKX6-1P78426 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NKX6-1P78426 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NKX6-1P78426 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms