Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.8□□□□□ -0.2
SEC61A1P61619 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
SEC61A1P61619 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SEC61A1P61619 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SEC61A1P61619 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.8□□□□□ -0.2
SEC61A1P61619 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.8□□□□□ -0.2
SEC61A1P61619 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC13.8□□□□□ -0.2
SEC61A1P61619 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SEC61A1P61619 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.8□□□□□ -0.2
SEC61A1P61619 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SEC61A1P61619 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SEC61A1P61619 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SEC61A1P61619 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SEC61A1P61619 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SEC61A1P61619 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
SEC61A1P61619 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC13.79□□□□□ -0.2
SEC61A1P61619 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.79□□□□□ -0.2
SEC61A1P61619 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
SEC61A1P61619 AL137784.3-201ENST00000623858 2288 ntBASIC13.79□□□□□ -0.2
SEC61A1P61619 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC13.79□□□□□ -0.2
SEC61A1P61619 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SEC61A1P61619 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SEC61A1P61619 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SEC61A1P61619 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
SEC61A1P61619 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SEC61A1P61619 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
SEC61A1P61619 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SEC61A1P61619 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SEC61A1P61619 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC13.79□□□□□ -0.2
SEC61A1P61619 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC13.79□□□□□ -0.2
SEC61A1P61619 HMGN1P19-201ENST00000436976 333 ntBASIC13.79□□□□□ -0.2
SEC61A1P61619 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC13.79□□□□□ -0.2
SEC61A1P61619 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SEC61A1P61619 TSFM-210ENST00000550559 897 ntTSL 5 BASIC13.79□□□□□ -0.2
SEC61A1P61619 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC13.79□□□□□ -0.2
SEC61A1P61619 AC020765.3-201ENST00000613051 740 ntBASIC13.79□□□□□ -0.2
SEC61A1P61619 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
SEC61A1P61619 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SEC61A1P61619 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.79□□□□□ -0.2
SEC61A1P61619 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
SEC61A1P61619 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC13.79□□□□□ -0.2
SEC61A1P61619 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SEC61A1P61619 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SEC61A1P61619 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SEC61A1P61619 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SEC61A1P61619 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.79□□□□□ -0.2
SEC61A1P61619 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SEC61A1P61619 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
SEC61A1P61619 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SEC61A1P61619 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SEC61A1P61619 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SEC61A1P61619 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SEC61A1P61619 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.79□□□□□ -0.2
SEC61A1P61619 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SEC61A1P61619 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SEC61A1P61619 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SEC61A1P61619 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC13.78□□□□□ -0.2
SEC61A1P61619 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SEC61A1P61619 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SEC61A1P61619 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.78□□□□□ -0.2
SEC61A1P61619 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.78□□□□□ -0.2
SEC61A1P61619 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
SEC61A1P61619 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
SEC61A1P61619 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SEC61A1P61619 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SEC61A1P61619 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SEC61A1P61619 AC232323.1-201ENST00000540724 2099 ntBASIC13.78□□□□□ -0.2
SEC61A1P61619 REXO1L5P-201ENST00000622260 2098 ntBASIC13.78□□□□□ -0.2
SEC61A1P61619 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
SEC61A1P61619 PNMT-202ENST00000394246 821 ntTSL 2 BASIC13.78□□□□□ -0.2
SEC61A1P61619 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SEC61A1P61619 GPS2P2-201ENST00000430745 888 ntBASIC13.78□□□□□ -0.2
SEC61A1P61619 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC13.78□□□□□ -0.2
SEC61A1P61619 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC13.78□□□□□ -0.2
SEC61A1P61619 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC13.78□□□□□ -0.2
SEC61A1P61619 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SEC61A1P61619 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SEC61A1P61619 RPL28-205ENST00000558131 444 ntTSL 5 BASIC13.78□□□□□ -0.2
SEC61A1P61619 AC027307.2-201ENST00000591252 911 ntBASIC13.78□□□□□ -0.2
SEC61A1P61619 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
SEC61A1P61619 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SEC61A1P61619 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SEC61A1P61619 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SEC61A1P61619 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC13.78□□□□□ -0.2
SEC61A1P61619 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC13.78□□□□□ -0.2
SEC61A1P61619 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SEC61A1P61619 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC13.78□□□□□ -0.2
SEC61A1P61619 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SEC61A1P61619 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
SEC61A1P61619 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC13.78□□□□□ -0.2
SEC61A1P61619 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SEC61A1P61619 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.78□□□□□ -0.2
SEC61A1P61619 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SEC61A1P61619 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SEC61A1P61619 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SEC61A1P61619 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SEC61A1P61619 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SEC61A1P61619 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
SEC61A1P61619 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
SEC61A1P61619 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms