Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
UBE2NP61088 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
UBE2NP61088 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UBE2NP61088 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UBE2NP61088 AC007541.1-201ENST00000570282 1469 ntBASIC13.8□□□□□ -0.2
UBE2NP61088 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UBE2NP61088 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
UBE2NP61088 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBE2NP61088 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC13.79□□□□□ -0.2
UBE2NP61088 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBE2NP61088 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.79□□□□□ -0.2
UBE2NP61088 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBE2NP61088 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
UBE2NP61088 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
UBE2NP61088 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC13.79□□□□□ -0.2
UBE2NP61088 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBE2NP61088 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
UBE2NP61088 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBE2NP61088 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBE2NP61088 KLK8-202ENST00000320838 456 ntTSL 5 BASIC13.79□□□□□ -0.2
UBE2NP61088 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.79□□□□□ -0.2
UBE2NP61088 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
UBE2NP61088 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
UBE2NP61088 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
UBE2NP61088 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
UBE2NP61088 SPTLC1P1-201ENST00000447199 261 ntBASIC13.79□□□□□ -0.2
UBE2NP61088 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
UBE2NP61088 AC092337.1-201ENST00000568699 1129 ntBASIC13.79□□□□□ -0.2
UBE2NP61088 AC138761.1-201ENST00000584393 385 ntBASIC13.79□□□□□ -0.2
UBE2NP61088 AC097359.3-201ENST00000603982 1210 ntBASIC13.79□□□□□ -0.2
UBE2NP61088 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
UBE2NP61088 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBE2NP61088 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
UBE2NP61088 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC13.79□□□□□ -0.2
UBE2NP61088 DEK-201ENST00000244776 1441 ntTSL 2 BASIC13.79□□□□□ -0.2
UBE2NP61088 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBE2NP61088 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
UBE2NP61088 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
UBE2NP61088 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBE2NP61088 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBE2NP61088 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
UBE2NP61088 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC13.79□□□□□ -0.2
UBE2NP61088 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBE2NP61088 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBE2NP61088 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
UBE2NP61088 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC13.79□□□□□ -0.2
UBE2NP61088 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
UBE2NP61088 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC13.79□□□□□ -0.2
UBE2NP61088 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
UBE2NP61088 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBE2NP61088 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBE2NP61088 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBE2NP61088 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBE2NP61088 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBE2NP61088 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBE2NP61088 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBE2NP61088 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBE2NP61088 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBE2NP61088 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBE2NP61088 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.78□□□□□ -0.2
UBE2NP61088 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
UBE2NP61088 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBE2NP61088 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBE2NP61088 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
UBE2NP61088 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBE2NP61088 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBE2NP61088 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC13.78□□□□□ -0.2
UBE2NP61088 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC13.78□□□□□ -0.2
UBE2NP61088 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBE2NP61088 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC13.78□□□□□ -0.2
UBE2NP61088 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBE2NP61088 CASK-202ENST00000378158 3848 ntTSL 5 BASIC13.78□□□□□ -0.2
UBE2NP61088 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBE2NP61088 AC087499.6-201ENST00000411576 835 ntBASIC13.78□□□□□ -0.2
UBE2NP61088 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.78□□□□□ -0.2
UBE2NP61088 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.78□□□□□ -0.2
UBE2NP61088 GNAQP1-201ENST00000444815 1067 ntBASIC13.78□□□□□ -0.2
UBE2NP61088 TMPRSS11CP-201ENST00000453277 683 ntBASIC13.78□□□□□ -0.2
UBE2NP61088 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBE2NP61088 SPDYE18-201ENST00000510091 1050 ntBASIC13.78□□□□□ -0.2
UBE2NP61088 AC055876.2-201ENST00000531834 546 ntBASIC13.78□□□□□ -0.2
UBE2NP61088 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.78□□□□□ -0.2
UBE2NP61088 COX11-202ENST00000571584 1108 ntTSL 2 BASIC13.78□□□□□ -0.2
UBE2NP61088 MIR4313-201ENST00000580760 101 ntBASIC13.78□□□□□ -0.2
UBE2NP61088 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.78□□□□□ -0.2
UBE2NP61088 AC027307.3-201ENST00000594262 1100 ntBASIC13.78□□□□□ -0.2
UBE2NP61088 AL132655.2-201ENST00000596276 594 ntBASIC13.78□□□□□ -0.2
UBE2NP61088 AF228730.6-201ENST00000641497 218 ntBASIC13.78□□□□□ -0.2
UBE2NP61088 AC084121.3-201ENST00000641716 218 ntBASIC13.78□□□□□ -0.2
UBE2NP61088 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
UBE2NP61088 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBE2NP61088 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
UBE2NP61088 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.78□□□□□ -0.2
UBE2NP61088 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBE2NP61088 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
UBE2NP61088 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.78□□□□□ -0.2
UBE2NP61088 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
UBE2NP61088 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBE2NP61088 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
UBE2NP61088 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms