Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
HIST1H2BDP58876 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC11.76□□□□□ -0.53
HIST1H2BDP58876 SLC25A1P2-201ENST00000430693 912 ntBASIC11.76□□□□□ -0.53
HIST1H2BDP58876 KRT18P48-201ENST00000434763 852 ntBASIC11.76□□□□□ -0.53
HIST1H2BDP58876 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
HIST1H2BDP58876 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC11.76□□□□□ -0.53
HIST1H2BDP58876 AC133681.1-201ENST00000465482 601 ntBASIC11.76□□□□□ -0.53
HIST1H2BDP58876 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC11.76□□□□□ -0.53
HIST1H2BDP58876 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
HIST1H2BDP58876 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC11.76□□□□□ -0.53
HIST1H2BDP58876 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC11.76□□□□□ -0.53
HIST1H2BDP58876 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC11.76□□□□□ -0.53
HIST1H2BDP58876 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
HIST1H2BDP58876 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
HIST1H2BDP58876 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC11.76□□□□□ -0.53
HIST1H2BDP58876 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
HIST1H2BDP58876 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
HIST1H2BDP58876 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
HIST1H2BDP58876 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
HIST1H2BDP58876 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
HIST1H2BDP58876 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
HIST1H2BDP58876 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC11.76□□□□□ -0.53
HIST1H2BDP58876 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
HIST1H2BDP58876 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
HIST1H2BDP58876 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
HIST1H2BDP58876 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
HIST1H2BDP58876 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
HIST1H2BDP58876 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
HIST1H2BDP58876 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC11.75□□□□□ -0.53
HIST1H2BDP58876 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC11.75□□□□□ -0.53
HIST1H2BDP58876 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
HIST1H2BDP58876 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
HIST1H2BDP58876 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC11.75□□□□□ -0.53
HIST1H2BDP58876 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
HIST1H2BDP58876 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC11.75□□□□□ -0.53
HIST1H2BDP58876 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
HIST1H2BDP58876 AC131009.4-201ENST00000624048 1740 ntBASIC11.75□□□□□ -0.53
HIST1H2BDP58876 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC11.75□□□□□ -0.53
HIST1H2BDP58876 GOLGA2P5-201ENST00000266746 2395 ntBASIC11.75□□□□□ -0.53
HIST1H2BDP58876 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
HIST1H2BDP58876 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
HIST1H2BDP58876 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
HIST1H2BDP58876 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
HIST1H2BDP58876 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
HIST1H2BDP58876 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
HIST1H2BDP58876 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
HIST1H2BDP58876 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
HIST1H2BDP58876 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
HIST1H2BDP58876 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC11.75□□□□□ -0.53
HIST1H2BDP58876 GAD2-202ENST00000376248 680 ntTSL 5 BASIC11.75□□□□□ -0.53
HIST1H2BDP58876 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
HIST1H2BDP58876 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC11.75□□□□□ -0.53
HIST1H2BDP58876 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC11.75□□□□□ -0.53
HIST1H2BDP58876 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC11.75□□□□□ -0.53
HIST1H2BDP58876 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
HIST1H2BDP58876 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC11.75□□□□□ -0.53
HIST1H2BDP58876 AC233263.1-201ENST00000578059 224 ntBASIC11.75□□□□□ -0.53
HIST1H2BDP58876 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
HIST1H2BDP58876 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC11.75□□□□□ -0.53
HIST1H2BDP58876 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
HIST1H2BDP58876 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
HIST1H2BDP58876 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
HIST1H2BDP58876 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
HIST1H2BDP58876 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC11.75□□□□□ -0.53
HIST1H2BDP58876 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
HIST1H2BDP58876 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
HIST1H2BDP58876 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
HIST1H2BDP58876 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC11.75□□□□□ -0.53
HIST1H2BDP58876 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
HIST1H2BDP58876 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
HIST1H2BDP58876 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
HIST1H2BDP58876 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
HIST1H2BDP58876 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
HIST1H2BDP58876 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC11.75□□□□□ -0.53
HIST1H2BDP58876 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC11.75□□□□□ -0.53
HIST1H2BDP58876 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC11.75□□□□□ -0.53
HIST1H2BDP58876 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
HIST1H2BDP58876 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC11.75□□□□□ -0.53
HIST1H2BDP58876 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC11.75□□□□□ -0.53
HIST1H2BDP58876 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HIST1H2BDP58876 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC11.74□□□□□ -0.53
HIST1H2BDP58876 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC11.74□□□□□ -0.53
HIST1H2BDP58876 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
HIST1H2BDP58876 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
HIST1H2BDP58876 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
HIST1H2BDP58876 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC11.74□□□□□ -0.53
HIST1H2BDP58876 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HIST1H2BDP58876 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HIST1H2BDP58876 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC11.74□□□□□ -0.53
HIST1H2BDP58876 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC11.74□□□□□ -0.53
HIST1H2BDP58876 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HIST1H2BDP58876 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HIST1H2BDP58876 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
HIST1H2BDP58876 FLII-221ENST00000578558 2377 ntTSL 5 BASIC11.74□□□□□ -0.53
HIST1H2BDP58876 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HIST1H2BDP58876 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HIST1H2BDP58876 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HIST1H2BDP58876 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HIST1H2BDP58876 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
HIST1H2BDP58876 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC11.74□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms