Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AC008741.2-201ENST00000612792 3115 ntBASIC15.92■□□□□ 0.14
CDH4P55283 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDH4P55283 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDH4P55283 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDH4P55283 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
CDH4P55283 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDH4P55283 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CDH4P55283 KRT17P7-201ENST00000451704 1104 ntBASIC15.92■□□□□ 0.14
CDH4P55283 RN7SL837P-201ENST00000463010 287 ntBASIC15.92■□□□□ 0.14
CDH4P55283 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDH4P55283 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC15.92■□□□□ 0.14
CDH4P55283 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.92■□□□□ 0.14
CDH4P55283 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC15.92■□□□□ 0.14
CDH4P55283 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.92■□□□□ 0.14
CDH4P55283 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.92■□□□□ 0.14
CDH4P55283 CU634019.7-201ENST00000624153 1185 ntBASIC15.92■□□□□ 0.14
CDH4P55283 AL035252.4-201ENST00000624174 288 ntBASIC15.92■□□□□ 0.14
CDH4P55283 FP236241.2-201ENST00000624906 1185 ntBASIC15.92■□□□□ 0.14
CDH4P55283 AL645728.2-202ENST00000641679 227 ntBASIC15.92■□□□□ 0.14
CDH4P55283 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDH4P55283 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.92■□□□□ 0.14
CDH4P55283 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CDH4P55283 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.92■□□□□ 0.14
CDH4P55283 AC087481.3-201ENST00000602886 1894 ntBASIC15.92■□□□□ 0.14
CDH4P55283 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CDH4P55283 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.92■□□□□ 0.14
CDH4P55283 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.92■□□□□ 0.14
CDH4P55283 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
CDH4P55283 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDH4P55283 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDH4P55283 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.92■□□□□ 0.14
CDH4P55283 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDH4P55283 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.92■□□□□ 0.14
CDH4P55283 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.92■□□□□ 0.14
CDH4P55283 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CDH4P55283 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
CDH4P55283 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC15.92■□□□□ 0.14
CDH4P55283 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CDH4P55283 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.91■□□□□ 0.14
CDH4P55283 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CDH4P55283 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CDH4P55283 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDH4P55283 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CDH4P55283 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.91■□□□□ 0.14
CDH4P55283 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CDH4P55283 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDH4P55283 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.91■□□□□ 0.14
CDH4P55283 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CDH4P55283 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.91■□□□□ 0.14
CDH4P55283 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CDH4P55283 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDH4P55283 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
CDH4P55283 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.91■□□□□ 0.14
CDH4P55283 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDH4P55283 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
CDH4P55283 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC15.91■□□□□ 0.14
CDH4P55283 AL512384.1-201ENST00000406683 331 ntBASIC15.91■□□□□ 0.14
CDH4P55283 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.91■□□□□ 0.14
CDH4P55283 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC15.91■□□□□ 0.14
CDH4P55283 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.91■□□□□ 0.14
CDH4P55283 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.91■□□□□ 0.14
CDH4P55283 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.91■□□□□ 0.14
CDH4P55283 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.91■□□□□ 0.14
CDH4P55283 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CDH4P55283 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CDH4P55283 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
CDH4P55283 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDH4P55283 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDH4P55283 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CDH4P55283 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDH4P55283 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CDH4P55283 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDH4P55283 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CDH4P55283 PAUPAR-201ENST00000630360 2965 ntBASIC15.9■□□□□ 0.14
CDH4P55283 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH4P55283 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CDH4P55283 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.9■□□□□ 0.14
CDH4P55283 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH4P55283 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH4P55283 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH4P55283 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH4P55283 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH4P55283 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CDH4P55283 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH4P55283 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CDH4P55283 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH4P55283 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH4P55283 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CDH4P55283 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH4P55283 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CDH4P55283 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH4P55283 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.9■□□□□ 0.14
CDH4P55283 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CDH4P55283 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.9■□□□□ 0.14
CDH4P55283 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.9■□□□□ 0.14
CDH4P55283 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.9■□□□□ 0.14
CDH4P55283 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.9■□□□□ 0.14
CDH4P55283 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.9■□□□□ 0.14
CDH4P55283 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.9■□□□□ 0.14
CDH4P55283 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms