Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC14.6□□□□□ -0.07
EFNA3P52797 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
EFNA3P52797 TTTY23B-201ENST00000442790 549 ntBASIC14.6□□□□□ -0.07
EFNA3P52797 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.6□□□□□ -0.07
EFNA3P52797 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC14.6□□□□□ -0.07
EFNA3P52797 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14.6□□□□□ -0.07
EFNA3P52797 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC14.6□□□□□ -0.07
EFNA3P52797 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
EFNA3P52797 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC14.6□□□□□ -0.07
EFNA3P52797 CLUHP6-201ENST00000580789 941 ntBASIC14.6□□□□□ -0.07
EFNA3P52797 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14.6□□□□□ -0.07
EFNA3P52797 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
EFNA3P52797 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.6□□□□□ -0.07
EFNA3P52797 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.6□□□□□ -0.07
EFNA3P52797 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.6□□□□□ -0.07
EFNA3P52797 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
EFNA3P52797 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
EFNA3P52797 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
EFNA3P52797 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.6□□□□□ -0.07
EFNA3P52797 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
EFNA3P52797 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
EFNA3P52797 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
EFNA3P52797 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
EFNA3P52797 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.6□□□□□ -0.07
EFNA3P52797 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
EFNA3P52797 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.6□□□□□ -0.07
EFNA3P52797 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
EFNA3P52797 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
EFNA3P52797 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.6□□□□□ -0.07
EFNA3P52797 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.6□□□□□ -0.07
EFNA3P52797 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
EFNA3P52797 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
EFNA3P52797 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
EFNA3P52797 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
EFNA3P52797 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
EFNA3P52797 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
EFNA3P52797 AC007950.2-201ENST00000615045 2347 ntBASIC14.59□□□□□ -0.07
EFNA3P52797 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.59□□□□□ -0.07
EFNA3P52797 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.59□□□□□ -0.07
EFNA3P52797 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
EFNA3P52797 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
EFNA3P52797 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.59□□□□□ -0.07
EFNA3P52797 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
EFNA3P52797 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
EFNA3P52797 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
EFNA3P52797 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.59□□□□□ -0.07
EFNA3P52797 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
EFNA3P52797 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
EFNA3P52797 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC14.59□□□□□ -0.07
EFNA3P52797 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.59□□□□□ -0.07
EFNA3P52797 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC14.59□□□□□ -0.07
EFNA3P52797 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.59□□□□□ -0.07
EFNA3P52797 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.59□□□□□ -0.07
EFNA3P52797 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
EFNA3P52797 USP32P1-208ENST00000506594 1164 ntBASIC14.59□□□□□ -0.07
EFNA3P52797 AC026410.3-201ENST00000514280 936 ntBASIC14.59□□□□□ -0.07
EFNA3P52797 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC14.59□□□□□ -0.07
EFNA3P52797 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC14.59□□□□□ -0.07
EFNA3P52797 HILS1-202ENST00000545329 423 ntBASIC14.59□□□□□ -0.07
EFNA3P52797 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.59□□□□□ -0.07
EFNA3P52797 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.59□□□□□ -0.07
EFNA3P52797 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.59□□□□□ -0.07
EFNA3P52797 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
EFNA3P52797 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
EFNA3P52797 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
EFNA3P52797 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
EFNA3P52797 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.59□□□□□ -0.07
EFNA3P52797 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
EFNA3P52797 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
EFNA3P52797 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
EFNA3P52797 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
EFNA3P52797 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
EFNA3P52797 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.59□□□□□ -0.07
EFNA3P52797 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
EFNA3P52797 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
EFNA3P52797 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
EFNA3P52797 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
EFNA3P52797 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
EFNA3P52797 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
EFNA3P52797 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
EFNA3P52797 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
EFNA3P52797 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.58□□□□□ -0.07
EFNA3P52797 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.07
EFNA3P52797 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
EFNA3P52797 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
EFNA3P52797 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
EFNA3P52797 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.58□□□□□ -0.07
EFNA3P52797 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.07
EFNA3P52797 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.07
EFNA3P52797 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
EFNA3P52797 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
EFNA3P52797 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
EFNA3P52797 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
EFNA3P52797 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
EFNA3P52797 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
EFNA3P52797 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.58□□□□□ -0.08
EFNA3P52797 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
EFNA3P52797 AC105250.1-201ENST00000509378 2057 ntBASIC14.58□□□□□ -0.08
EFNA3P52797 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.58□□□□□ -0.08
EFNA3P52797 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms