Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLC1A3P43003 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SLC1A3P43003 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.43□□□□□ -0.1
SLC1A3P43003 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLC1A3P43003 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SLC1A3P43003 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLC1A3P43003 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.43□□□□□ -0.1
SLC1A3P43003 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.43□□□□□ -0.1
SLC1A3P43003 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.43□□□□□ -0.1
SLC1A3P43003 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
SLC1A3P43003 HNRNPUP1-201ENST00000554987 333 ntBASIC14.43□□□□□ -0.1
SLC1A3P43003 AC004449.1-201ENST00000564240 433 ntBASIC14.43□□□□□ -0.1
SLC1A3P43003 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.43□□□□□ -0.1
SLC1A3P43003 AC097359.3-201ENST00000603982 1210 ntBASIC14.43□□□□□ -0.1
SLC1A3P43003 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLC1A3P43003 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.43□□□□□ -0.1
SLC1A3P43003 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLC1A3P43003 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLC1A3P43003 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
SLC1A3P43003 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SLC1A3P43003 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
SLC1A3P43003 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLC1A3P43003 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
SLC1A3P43003 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLC1A3P43003 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.43□□□□□ -0.1
SLC1A3P43003 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.43□□□□□ -0.1
SLC1A3P43003 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLC1A3P43003 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC1A3P43003 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
SLC1A3P43003 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC1A3P43003 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SLC1A3P43003 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SLC1A3P43003 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.42□□□□□ -0.1
SLC1A3P43003 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
SLC1A3P43003 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
SLC1A3P43003 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SLC1A3P43003 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SLC1A3P43003 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
SLC1A3P43003 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC1A3P43003 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
SLC1A3P43003 HIST3H2BA-201ENST00000436555 524 ntBASIC14.42□□□□□ -0.1
SLC1A3P43003 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC1A3P43003 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
SLC1A3P43003 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.42□□□□□ -0.1
SLC1A3P43003 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.42□□□□□ -0.1
SLC1A3P43003 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.42□□□□□ -0.1
SLC1A3P43003 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.42□□□□□ -0.1
SLC1A3P43003 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.42□□□□□ -0.1
SLC1A3P43003 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.42□□□□□ -0.1
SLC1A3P43003 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC14.42□□□□□ -0.1
SLC1A3P43003 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
SLC1A3P43003 Z92544.3-201ENST00000624747 417 ntBASIC14.42□□□□□ -0.1
SLC1A3P43003 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC1A3P43003 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.42□□□□□ -0.1
SLC1A3P43003 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.42□□□□□ -0.1
SLC1A3P43003 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC1A3P43003 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
SLC1A3P43003 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.42□□□□□ -0.1
SLC1A3P43003 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC1A3P43003 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.42□□□□□ -0.1
SLC1A3P43003 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC1A3P43003 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC1A3P43003 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC1A3P43003 LINC01101-201ENST00000622953 1884 ntBASIC14.42□□□□□ -0.1
SLC1A3P43003 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SLC1A3P43003 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
SLC1A3P43003 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SLC1A3P43003 AC112693.3-201ENST00000624819 1983 ntBASIC14.42□□□□□ -0.1
SLC1A3P43003 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC1A3P43003 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SLC1A3P43003 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC1A3P43003 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC1A3P43003 TUBB3P1-201ENST00000405796 1332 ntBASIC14.41□□□□□ -0.1
SLC1A3P43003 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SLC1A3P43003 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC1A3P43003 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.41□□□□□ -0.1
SLC1A3P43003 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SLC1A3P43003 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
SLC1A3P43003 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC1A3P43003 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC1A3P43003 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC1A3P43003 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC1A3P43003 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.41□□□□□ -0.1
SLC1A3P43003 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
SLC1A3P43003 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SLC1A3P43003 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC1A3P43003 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC1A3P43003 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC1A3P43003 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.41□□□□□ -0.1
SLC1A3P43003 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.41□□□□□ -0.1
SLC1A3P43003 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.41□□□□□ -0.1
SLC1A3P43003 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.41□□□□□ -0.1
SLC1A3P43003 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC1A3P43003 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SLC1A3P43003 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
SLC1A3P43003 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
SLC1A3P43003 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.41□□□□□ -0.1
SLC1A3P43003 SERBP1P3-201ENST00000459980 809 ntBASIC14.41□□□□□ -0.1
SLC1A3P43003 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.41□□□□□ -0.1
SLC1A3P43003 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms