Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDE6BP35913 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDE6BP35913 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDE6BP35913 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PDE6BP35913 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDE6BP35913 KRT8P29-201ENST00000420409 1371 ntBASIC19.05■□□□□ 0.64
PDE6BP35913 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PDE6BP35913 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDE6BP35913 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDE6BP35913 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDE6BP35913 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDE6BP35913 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDE6BP35913 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDE6BP35913 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDE6BP35913 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDE6BP35913 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC19.04■□□□□ 0.64
PDE6BP35913 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDE6BP35913 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PDE6BP35913 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PDE6BP35913 DPM3-202ENST00000368399 517 ntBASIC19.04■□□□□ 0.64
PDE6BP35913 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC19.04■□□□□ 0.64
PDE6BP35913 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
PDE6BP35913 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC19.04■□□□□ 0.64
PDE6BP35913 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDE6BP35913 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC19.04■□□□□ 0.64
PDE6BP35913 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC19.04■□□□□ 0.64
PDE6BP35913 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC19.04■□□□□ 0.64
PDE6BP35913 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC19.04■□□□□ 0.64
PDE6BP35913 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
PDE6BP35913 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDE6BP35913 MIR7845-201ENST00000618396 99 ntBASIC19.04■□□□□ 0.64
PDE6BP35913 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
PDE6BP35913 AC022748.3-201ENST00000621828 275 ntBASIC19.04■□□□□ 0.64
PDE6BP35913 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC19.04■□□□□ 0.64
PDE6BP35913 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC19.04■□□□□ 0.64
PDE6BP35913 OR6D1P-203ENST00000641209 4860 ntBASIC19.04■□□□□ 0.64
PDE6BP35913 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDE6BP35913 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
PDE6BP35913 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PDE6BP35913 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC19.04■□□□□ 0.64
PDE6BP35913 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDE6BP35913 AC008132.1-202ENST00000342005 1389 ntBASIC19.04■□□□□ 0.64
PDE6BP35913 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDE6BP35913 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDE6BP35913 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDE6BP35913 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDE6BP35913 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PDE6BP35913 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PDE6BP35913 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDE6BP35913 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
PDE6BP35913 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PDE6BP35913 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PDE6BP35913 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
PDE6BP35913 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PDE6BP35913 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PDE6BP35913 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
PDE6BP35913 IGF1-203ENST00000392904 761 ntTSL 5 BASIC19.03■□□□□ 0.64
PDE6BP35913 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC19.03■□□□□ 0.64
PDE6BP35913 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PDE6BP35913 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC19.03■□□□□ 0.64
PDE6BP35913 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDE6BP35913 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC19.03■□□□□ 0.64
PDE6BP35913 AC022616.1-201ENST00000518688 554 ntBASIC19.03■□□□□ 0.64
PDE6BP35913 AC024681.1-201ENST00000521917 487 ntBASIC19.03■□□□□ 0.64
PDE6BP35913 AP003171.2-201ENST00000528208 925 ntBASIC19.03■□□□□ 0.64
PDE6BP35913 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
PDE6BP35913 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC19.03■□□□□ 0.64
PDE6BP35913 RN7SL574P-201ENST00000581512 297 ntBASIC19.03■□□□□ 0.64
PDE6BP35913 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
PDE6BP35913 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC19.03■□□□□ 0.64
PDE6BP35913 AL603764.1-201ENST00000636452 321 ntBASIC19.03■□□□□ 0.64
PDE6BP35913 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC19.03■□□□□ 0.64
PDE6BP35913 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC19.03■□□□□ 0.64
PDE6BP35913 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PDE6BP35913 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PDE6BP35913 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC19.03■□□□□ 0.64
PDE6BP35913 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
PDE6BP35913 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDE6BP35913 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
PDE6BP35913 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
PDE6BP35913 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC19.03■□□□□ 0.64
PDE6BP35913 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
PDE6BP35913 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDE6BP35913 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PDE6BP35913 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDE6BP35913 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDE6BP35913 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PDE6BP35913 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC19.02■□□□□ 0.64
PDE6BP35913 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC19.02■□□□□ 0.64
PDE6BP35913 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDE6BP35913 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC19.02■□□□□ 0.64
PDE6BP35913 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDE6BP35913 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDE6BP35913 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDE6BP35913 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PDE6BP35913 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PDE6BP35913 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDE6BP35913 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC19.02■□□□□ 0.64
PDE6BP35913 EEF1DP6-201ENST00000449232 372 ntBASIC19.02■□□□□ 0.64
PDE6BP35913 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms