Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RORAP35398 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
RORAP35398 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RORAP35398 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RORAP35398 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RORAP35398 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RORAP35398 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RORAP35398 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RORAP35398 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.88□□□□□ -0.03
RORAP35398 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
RORAP35398 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RORAP35398 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
RORAP35398 LINC00554-201ENST00000564841 3011 ntBASIC14.87□□□□□ -0.03
RORAP35398 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
RORAP35398 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
RORAP35398 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.87□□□□□ -0.03
RORAP35398 AC112504.1-201ENST00000623415 1841 ntBASIC14.87□□□□□ -0.03
RORAP35398 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RORAP35398 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
RORAP35398 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RORAP35398 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RORAP35398 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RORAP35398 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RORAP35398 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
RORAP35398 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.87□□□□□ -0.03
RORAP35398 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RORAP35398 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.87□□□□□ -0.03
RORAP35398 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
RORAP35398 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RORAP35398 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC14.87□□□□□ -0.03
RORAP35398 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
RORAP35398 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RORAP35398 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.87□□□□□ -0.03
RORAP35398 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
RORAP35398 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.87□□□□□ -0.03
RORAP35398 AL162726.2-201ENST00000438986 1017 ntBASIC14.87□□□□□ -0.03
RORAP35398 AC007274.1-201ENST00000439805 662 ntBASIC14.87□□□□□ -0.03
RORAP35398 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
RORAP35398 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC14.87□□□□□ -0.03
RORAP35398 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.87□□□□□ -0.03
RORAP35398 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC14.87□□□□□ -0.03
RORAP35398 AL359711.2-201ENST00000563105 872 ntBASIC14.87□□□□□ -0.03
RORAP35398 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.87□□□□□ -0.03
RORAP35398 AC000095.1-201ENST00000603208 874 ntBASIC14.87□□□□□ -0.03
RORAP35398 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.87□□□□□ -0.03
RORAP35398 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RORAP35398 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
RORAP35398 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
RORAP35398 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.87□□□□□ -0.03
RORAP35398 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RORAP35398 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RORAP35398 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RORAP35398 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
RORAP35398 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.87□□□□□ -0.03
RORAP35398 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
RORAP35398 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
RORAP35398 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.87□□□□□ -0.03
RORAP35398 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RORAP35398 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
RORAP35398 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.87□□□□□ -0.03
RORAP35398 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RORAP35398 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RORAP35398 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RORAP35398 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.87□□□□□ -0.03
RORAP35398 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RORAP35398 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RORAP35398 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RORAP35398 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RORAP35398 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.87□□□□□ -0.03
RORAP35398 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
RORAP35398 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC14.87□□□□□ -0.03
RORAP35398 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
RORAP35398 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
RORAP35398 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
RORAP35398 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
RORAP35398 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RORAP35398 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
RORAP35398 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.86□□□□□ -0.03
RORAP35398 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RORAP35398 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
RORAP35398 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RORAP35398 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RORAP35398 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
RORAP35398 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.86□□□□□ -0.03
RORAP35398 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RORAP35398 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RORAP35398 KRT8P22-201ENST00000562317 1415 ntBASIC14.86□□□□□ -0.03
RORAP35398 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RORAP35398 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RORAP35398 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RORAP35398 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
RORAP35398 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RORAP35398 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.86□□□□□ -0.03
RORAP35398 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC14.86□□□□□ -0.03
RORAP35398 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
RORAP35398 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.86□□□□□ -0.03
RORAP35398 AC124283.3-201ENST00000570869 594 ntBASIC14.86□□□□□ -0.03
RORAP35398 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RORAP35398 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
RORAP35398 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms