Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
ABCD3P28288 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.41□□□□□ -0.1
ABCD3P28288 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.41□□□□□ -0.1
ABCD3P28288 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ABCD3P28288 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
ABCD3P28288 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.41□□□□□ -0.1
ABCD3P28288 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
ABCD3P28288 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.41□□□□□ -0.1
ABCD3P28288 CALY-203ENST00000368558 825 ntTSL 5 BASIC14.41□□□□□ -0.1
ABCD3P28288 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.41□□□□□ -0.1
ABCD3P28288 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.41□□□□□ -0.1
ABCD3P28288 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ABCD3P28288 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
ABCD3P28288 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.41□□□□□ -0.1
ABCD3P28288 CRB3P1-201ENST00000449338 276 ntBASIC14.41□□□□□ -0.1
ABCD3P28288 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.41□□□□□ -0.1
ABCD3P28288 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.41□□□□□ -0.1
ABCD3P28288 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC14.41□□□□□ -0.1
ABCD3P28288 API5-211ENST00000534695 560 ntTSL 5 BASIC14.41□□□□□ -0.1
ABCD3P28288 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.41□□□□□ -0.1
ABCD3P28288 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.41□□□□□ -0.1
ABCD3P28288 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.41□□□□□ -0.1
ABCD3P28288 AC000095.1-201ENST00000603208 874 ntBASIC14.41□□□□□ -0.1
ABCD3P28288 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.41□□□□□ -0.1
ABCD3P28288 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
ABCD3P28288 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.41□□□□□ -0.1
ABCD3P28288 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
ABCD3P28288 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
ABCD3P28288 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ABCD3P28288 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ABCD3P28288 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ABCD3P28288 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
ABCD3P28288 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ABCD3P28288 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
ABCD3P28288 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.41□□□□□ -0.1
ABCD3P28288 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.41□□□□□ -0.1
ABCD3P28288 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ABCD3P28288 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ABCD3P28288 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ABCD3P28288 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ABCD3P28288 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
ABCD3P28288 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
ABCD3P28288 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
ABCD3P28288 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ABCD3P28288 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
ABCD3P28288 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ABCD3P28288 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ABCD3P28288 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.4□□□□□ -0.1
ABCD3P28288 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ABCD3P28288 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ABCD3P28288 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ABCD3P28288 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ABCD3P28288 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.4□□□□□ -0.1
ABCD3P28288 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.4□□□□□ -0.1
ABCD3P28288 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
ABCD3P28288 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.4□□□□□ -0.1
ABCD3P28288 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.4□□□□□ -0.1
ABCD3P28288 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ABCD3P28288 RN7SL399P-201ENST00000471648 279 ntBASIC14.4□□□□□ -0.1
ABCD3P28288 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC14.4□□□□□ -0.1
ABCD3P28288 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.4□□□□□ -0.1
ABCD3P28288 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.4□□□□□ -0.1
ABCD3P28288 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.4□□□□□ -0.1
ABCD3P28288 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.4□□□□□ -0.1
ABCD3P28288 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ABCD3P28288 AC093726.1-201ENST00000608064 963 ntBASIC14.4□□□□□ -0.1
ABCD3P28288 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.4□□□□□ -0.1
ABCD3P28288 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.4□□□□□ -0.1
ABCD3P28288 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
ABCD3P28288 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
ABCD3P28288 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
ABCD3P28288 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.4□□□□□ -0.1
ABCD3P28288 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
ABCD3P28288 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.4□□□□□ -0.1
ABCD3P28288 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ABCD3P28288 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.4□□□□□ -0.1
ABCD3P28288 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ABCD3P28288 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
ABCD3P28288 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ABCD3P28288 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
ABCD3P28288 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ABCD3P28288 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.39□□□□□ -0.11
ABCD3P28288 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ABCD3P28288 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ABCD3P28288 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.39□□□□□ -0.11
ABCD3P28288 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.39□□□□□ -0.11
ABCD3P28288 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
ABCD3P28288 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ABCD3P28288 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.39□□□□□ -0.11
ABCD3P28288 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
ABCD3P28288 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ABCD3P28288 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ABCD3P28288 LINC02228-204ENST00000642115 2962 ntBASIC14.39□□□□□ -0.11
ABCD3P28288 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ABCD3P28288 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
ABCD3P28288 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ABCD3P28288 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
ABCD3P28288 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.39□□□□□ -0.11
ABCD3P28288 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ABCD3P28288 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms