Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.86□□□□□ -0.03
MMP11P24347 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.86□□□□□ -0.03
MMP11P24347 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MMP11P24347 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.86□□□□□ -0.03
MMP11P24347 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
MMP11P24347 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
MMP11P24347 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MMP11P24347 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
MMP11P24347 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
MMP11P24347 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
MMP11P24347 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.86□□□□□ -0.03
MMP11P24347 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MMP11P24347 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
MMP11P24347 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
MMP11P24347 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MMP11P24347 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MMP11P24347 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
MMP11P24347 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MMP11P24347 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
MMP11P24347 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.85□□□□□ -0.03
MMP11P24347 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.85□□□□□ -0.03
MMP11P24347 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MMP11P24347 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
MMP11P24347 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.85□□□□□ -0.03
MMP11P24347 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
MMP11P24347 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MMP11P24347 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.85□□□□□ -0.03
MMP11P24347 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MMP11P24347 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.85□□□□□ -0.03
MMP11P24347 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
MMP11P24347 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.85□□□□□ -0.03
MMP11P24347 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.85□□□□□ -0.03
MMP11P24347 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MMP11P24347 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
MMP11P24347 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
MMP11P24347 AP002414.2-201ENST00000591780 3365 ntBASIC14.85□□□□□ -0.03
MMP11P24347 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
MMP11P24347 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.85□□□□□ -0.03
MMP11P24347 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
MMP11P24347 TARDBPP1-201ENST00000442013 1203 ntBASIC14.85□□□□□ -0.03
MMP11P24347 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.85□□□□□ -0.03
MMP11P24347 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
MMP11P24347 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
MMP11P24347 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14.85□□□□□ -0.03
MMP11P24347 CTBP2P3-201ENST00000585629 1255 ntBASIC14.85□□□□□ -0.03
MMP11P24347 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC14.85□□□□□ -0.03
MMP11P24347 IGHV3-72-202ENST00000621503 303 ntBASIC14.85□□□□□ -0.03
MMP11P24347 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC14.85□□□□□ -0.03
MMP11P24347 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MMP11P24347 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
MMP11P24347 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MMP11P24347 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
MMP11P24347 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MMP11P24347 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MMP11P24347 MST1L-201ENST00000442552 2185 ntBASIC14.85□□□□□ -0.03
MMP11P24347 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
MMP11P24347 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
MMP11P24347 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MMP11P24347 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
MMP11P24347 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.85□□□□□ -0.03
MMP11P24347 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MMP11P24347 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MMP11P24347 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.85□□□□□ -0.03
MMP11P24347 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
MMP11P24347 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MMP11P24347 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
MMP11P24347 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MMP11P24347 AC020658.6-201ENST00000623564 1870 ntBASIC14.84□□□□□ -0.03
MMP11P24347 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MMP11P24347 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
MMP11P24347 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.84□□□□□ -0.03
MMP11P24347 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.84□□□□□ -0.03
MMP11P24347 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MMP11P24347 AC134407.2-201ENST00000625089 1978 ntBASIC14.84□□□□□ -0.03
MMP11P24347 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.84□□□□□ -0.03
MMP11P24347 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
MMP11P24347 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.84□□□□□ -0.03
MMP11P24347 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MMP11P24347 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
MMP11P24347 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.84□□□□□ -0.03
MMP11P24347 AC098850.1-201ENST00000419919 790 ntBASIC14.84□□□□□ -0.03
MMP11P24347 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC14.84□□□□□ -0.03
MMP11P24347 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC14.84□□□□□ -0.03
MMP11P24347 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.84□□□□□ -0.03
MMP11P24347 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.84□□□□□ -0.03
MMP11P24347 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.84□□□□□ -0.03
MMP11P24347 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.84□□□□□ -0.03
MMP11P24347 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC14.84□□□□□ -0.03
MMP11P24347 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
MMP11P24347 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
MMP11P24347 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MMP11P24347 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
MMP11P24347 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MMP11P24347 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.84□□□□□ -0.03
MMP11P24347 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MMP11P24347 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MMP11P24347 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.84□□□□□ -0.03
MMP11P24347 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
MMP11P24347 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.84□□□□□ -0.03
MMP11P24347 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms