Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CD53P19397 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.29□□□□□ -0.12
CD53P19397 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CD53P19397 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD53P19397 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.28□□□□□ -0.12
CD53P19397 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.28□□□□□ -0.12
CD53P19397 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CD53P19397 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.28□□□□□ -0.12
CD53P19397 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD53P19397 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CD53P19397 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.28□□□□□ -0.12
CD53P19397 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD53P19397 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CD53P19397 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD53P19397 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
CD53P19397 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD53P19397 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD53P19397 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
CD53P19397 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD53P19397 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CD53P19397 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.28□□□□□ -0.12
CD53P19397 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CD53P19397 RNU1-129P-201ENST00000384064 167 ntBASIC14.28□□□□□ -0.12
CD53P19397 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD53P19397 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.28□□□□□ -0.12
CD53P19397 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.28□□□□□ -0.12
CD53P19397 CICP13-201ENST00000422015 2789 ntBASIC14.28□□□□□ -0.12
CD53P19397 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.28□□□□□ -0.12
CD53P19397 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.28□□□□□ -0.12
CD53P19397 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.28□□□□□ -0.12
CD53P19397 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CD53P19397 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC14.28□□□□□ -0.12
CD53P19397 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CD53P19397 AC027369.6-201ENST00000525520 931 ntBASIC14.28□□□□□ -0.12
CD53P19397 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.28□□□□□ -0.12
CD53P19397 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.28□□□□□ -0.12
CD53P19397 AP001282.1-201ENST00000531301 1499 ntBASIC14.28□□□□□ -0.12
CD53P19397 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.28□□□□□ -0.12
CD53P19397 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
CD53P19397 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD53P19397 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.28□□□□□ -0.12
CD53P19397 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD53P19397 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC14.28□□□□□ -0.12
CD53P19397 AL596325.1-201ENST00000563991 1082 ntBASIC14.28□□□□□ -0.12
CD53P19397 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.28□□□□□ -0.12
CD53P19397 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC14.28□□□□□ -0.12
CD53P19397 MIR3909-201ENST00000579518 119 ntBASIC14.28□□□□□ -0.12
CD53P19397 U1.21-201ENST00000580816 167 ntBASIC14.28□□□□□ -0.12
CD53P19397 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.28□□□□□ -0.12
CD53P19397 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD53P19397 AC073592.8-201ENST00000624126 511 ntBASIC14.28□□□□□ -0.12
CD53P19397 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.28□□□□□ -0.12
CD53P19397 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.28□□□□□ -0.12
CD53P19397 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD53P19397 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.28□□□□□ -0.12
CD53P19397 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CD53P19397 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD53P19397 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD53P19397 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.28□□□□□ -0.12
CD53P19397 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.28□□□□□ -0.12
CD53P19397 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.28□□□□□ -0.12
CD53P19397 CICP24-201ENST00000605464 2705 ntBASIC14.28□□□□□ -0.12
CD53P19397 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD53P19397 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD53P19397 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD53P19397 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CD53P19397 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CD53P19397 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CD53P19397 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
CD53P19397 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.27□□□□□ -0.12
CD53P19397 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CD53P19397 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CD53P19397 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CD53P19397 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.27□□□□□ -0.12
CD53P19397 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CD53P19397 AC100757.3-201ENST00000622361 1406 ntBASIC14.27□□□□□ -0.12
CD53P19397 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CD53P19397 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CD53P19397 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
CD53P19397 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
CD53P19397 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CD53P19397 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CD53P19397 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CD53P19397 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CD53P19397 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.27□□□□□ -0.13
CD53P19397 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.27□□□□□ -0.13
CD53P19397 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CD53P19397 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC14.27□□□□□ -0.13
CD53P19397 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
CD53P19397 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.27□□□□□ -0.13
CD53P19397 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.27□□□□□ -0.13
CD53P19397 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
CD53P19397 AL590560.3-201ENST00000623350 461 ntBASIC14.27□□□□□ -0.13
CD53P19397 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
CD53P19397 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CD53P19397 AC112693.3-201ENST00000624819 1983 ntBASIC14.27□□□□□ -0.13
CD53P19397 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CD53P19397 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
CD53P19397 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CD53P19397 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms