Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CTPS1P17812 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.72■□□□□ 0.11
CTPS1P17812 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.72■□□□□ 0.11
CTPS1P17812 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.72■□□□□ 0.11
CTPS1P17812 AC136621.1-201ENST00000624017 2304 ntBASIC15.72■□□□□ 0.11
CTPS1P17812 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CTPS1P17812 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
CTPS1P17812 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CTPS1P17812 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CTPS1P17812 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.72■□□□□ 0.11
CTPS1P17812 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.72■□□□□ 0.11
CTPS1P17812 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CTPS1P17812 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.71■□□□□ 0.11
CTPS1P17812 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CTPS1P17812 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.71■□□□□ 0.11
CTPS1P17812 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CTPS1P17812 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CTPS1P17812 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CTPS1P17812 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CTPS1P17812 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CTPS1P17812 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CTPS1P17812 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CTPS1P17812 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CTPS1P17812 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CTPS1P17812 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CTPS1P17812 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
CTPS1P17812 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CTPS1P17812 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CTPS1P17812 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.71■□□□□ 0.11
CTPS1P17812 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CTPS1P17812 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.71■□□□□ 0.11
CTPS1P17812 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CTPS1P17812 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CTPS1P17812 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.71■□□□□ 0.11
CTPS1P17812 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CTPS1P17812 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.71■□□□□ 0.11
CTPS1P17812 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.71■□□□□ 0.11
CTPS1P17812 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.71■□□□□ 0.11
CTPS1P17812 KRT18P43-201ENST00000469825 1281 ntBASIC15.71■□□□□ 0.11
CTPS1P17812 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.71■□□□□ 0.11
CTPS1P17812 AL391069.4-201ENST00000609583 481 ntBASIC15.71■□□□□ 0.11
CTPS1P17812 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
CTPS1P17812 AC007431.3-201ENST00000623221 587 ntBASIC15.71■□□□□ 0.11
CTPS1P17812 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
CTPS1P17812 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.71■□□□□ 0.11
CTPS1P17812 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.71■□□□□ 0.11
CTPS1P17812 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.71■□□□□ 0.11
CTPS1P17812 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
CTPS1P17812 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
CTPS1P17812 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.71■□□□□ 0.11
CTPS1P17812 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CTPS1P17812 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.71■□□□□ 0.1
CTPS1P17812 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CTPS1P17812 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.1
CTPS1P17812 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.71■□□□□ 0.1
CTPS1P17812 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
CTPS1P17812 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CTPS1P17812 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.71■□□□□ 0.1
CTPS1P17812 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CTPS1P17812 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.71■□□□□ 0.1
CTPS1P17812 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CTPS1P17812 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.7■□□□□ 0.1
CTPS1P17812 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CTPS1P17812 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CTPS1P17812 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.7■□□□□ 0.1
CTPS1P17812 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CTPS1P17812 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CTPS1P17812 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC15.7■□□□□ 0.1
CTPS1P17812 AC020658.6-201ENST00000623564 1870 ntBASIC15.7■□□□□ 0.1
CTPS1P17812 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CTPS1P17812 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CTPS1P17812 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.7■□□□□ 0.1
CTPS1P17812 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CTPS1P17812 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CTPS1P17812 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CTPS1P17812 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CTPS1P17812 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CTPS1P17812 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
CTPS1P17812 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CTPS1P17812 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CTPS1P17812 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
CTPS1P17812 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CTPS1P17812 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.7■□□□□ 0.1
CTPS1P17812 AC098850.1-201ENST00000419919 790 ntBASIC15.7■□□□□ 0.1
CTPS1P17812 MEP1AP4-201ENST00000423244 1087 ntBASIC15.7■□□□□ 0.1
CTPS1P17812 AL353779.1-201ENST00000434793 351 ntBASIC15.7■□□□□ 0.1
CTPS1P17812 CRB3P1-201ENST00000449338 276 ntBASIC15.7■□□□□ 0.1
CTPS1P17812 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC15.7■□□□□ 0.1
CTPS1P17812 RN7SL399P-201ENST00000471648 279 ntBASIC15.7■□□□□ 0.1
CTPS1P17812 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15.7■□□□□ 0.1
CTPS1P17812 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.7■□□□□ 0.1
CTPS1P17812 AC123567.1-201ENST00000548294 1261 ntBASIC15.7■□□□□ 0.1
CTPS1P17812 AC036164.1-201ENST00000570544 333 ntBASIC15.7■□□□□ 0.1
CTPS1P17812 AC015910.1-201ENST00000579400 975 ntBASIC15.7■□□□□ 0.1
CTPS1P17812 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CTPS1P17812 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC15.7■□□□□ 0.1
CTPS1P17812 AC008494.3-201ENST00000606615 944 ntBASIC15.7■□□□□ 0.1
CTPS1P17812 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC15.7■□□□□ 0.1
CTPS1P17812 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.7■□□□□ 0.1
CTPS1P17812 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms