Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.51■□□□□ 0.23
KRT3P12035 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.51■□□□□ 0.23
KRT3P12035 SLED1-202ENST00000512051 380 ntBASIC16.51■□□□□ 0.23
KRT3P12035 SDHAP3-202ENST00000515467 728 ntBASIC16.51■□□□□ 0.23
KRT3P12035 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.51■□□□□ 0.23
KRT3P12035 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.51■□□□□ 0.23
KRT3P12035 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
KRT3P12035 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.51■□□□□ 0.23
KRT3P12035 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.51■□□□□ 0.23
KRT3P12035 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.51■□□□□ 0.23
KRT3P12035 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.51■□□□□ 0.23
KRT3P12035 AL590560.3-201ENST00000623350 461 ntBASIC16.51■□□□□ 0.23
KRT3P12035 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
KRT3P12035 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.51■□□□□ 0.23
KRT3P12035 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT3P12035 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT3P12035 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.51■□□□□ 0.23
KRT3P12035 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.51■□□□□ 0.23
KRT3P12035 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT3P12035 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.51■□□□□ 0.23
KRT3P12035 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
KRT3P12035 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
KRT3P12035 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT3P12035 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT3P12035 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT3P12035 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT3P12035 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
KRT3P12035 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
KRT3P12035 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
KRT3P12035 AC023157.3-201ENST00000619086 2088 ntBASIC16.5■□□□□ 0.23
KRT3P12035 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
KRT3P12035 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT3P12035 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT3P12035 AC006486.2-201ENST00000624246 2199 ntBASIC16.5■□□□□ 0.23
KRT3P12035 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.5■□□□□ 0.23
KRT3P12035 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.5■□□□□ 0.23
KRT3P12035 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
KRT3P12035 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT3P12035 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
KRT3P12035 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT3P12035 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT3P12035 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.5■□□□□ 0.23
KRT3P12035 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.5■□□□□ 0.23
KRT3P12035 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.5■□□□□ 0.23
KRT3P12035 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.5■□□□□ 0.23
KRT3P12035 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.5■□□□□ 0.23
KRT3P12035 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.5■□□□□ 0.23
KRT3P12035 IGHV3-42-201ENST00000520410 361 ntBASIC16.5■□□□□ 0.23
KRT3P12035 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.5■□□□□ 0.23
KRT3P12035 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
KRT3P12035 AL109936.8-201ENST00000641772 604 ntBASIC16.5■□□□□ 0.23
KRT3P12035 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
KRT3P12035 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
KRT3P12035 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT3P12035 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.5■□□□□ 0.23
KRT3P12035 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
KRT3P12035 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
KRT3P12035 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT3P12035 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
KRT3P12035 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT3P12035 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
KRT3P12035 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.5■□□□□ 0.23
KRT3P12035 AL365209.1-201ENST00000624418 6473 ntBASIC16.5■□□□□ 0.23
KRT3P12035 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT3P12035 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.5■□□□□ 0.23
KRT3P12035 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KRT3P12035 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.49■□□□□ 0.23
KRT3P12035 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.49■□□□□ 0.23
KRT3P12035 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
KRT3P12035 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.49■□□□□ 0.23
KRT3P12035 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
KRT3P12035 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.49■□□□□ 0.23
KRT3P12035 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
KRT3P12035 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.49■□□□□ 0.23
KRT3P12035 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KRT3P12035 TK2-221ENST00000620035 5060 ntTSL 2 BASIC16.49■□□□□ 0.23
KRT3P12035 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KRT3P12035 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.49■□□□□ 0.23
KRT3P12035 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
KRT3P12035 AC241585.1-201ENST00000433527 519 ntBASIC16.49■□□□□ 0.23
KRT3P12035 KRT18P64-201ENST00000434946 1219 ntBASIC16.49■□□□□ 0.23
KRT3P12035 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
KRT3P12035 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.49■□□□□ 0.23
KRT3P12035 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
KRT3P12035 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.49■□□□□ 0.23
KRT3P12035 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
KRT3P12035 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
KRT3P12035 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.49■□□□□ 0.23
KRT3P12035 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
KRT3P12035 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
KRT3P12035 AL844908.2-201ENST00000609461 460 ntBASIC16.49■□□□□ 0.23
KRT3P12035 AC074044.1-201ENST00000609673 707 ntBASIC16.49■□□□□ 0.23
KRT3P12035 AF228730.6-201ENST00000641497 218 ntBASIC16.49■□□□□ 0.23
KRT3P12035 AC084121.3-201ENST00000641716 218 ntBASIC16.49■□□□□ 0.23
KRT3P12035 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KRT3P12035 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
KRT3P12035 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
KRT3P12035 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.49■□□□□ 0.23
KRT3P12035 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.49■□□□□ 0.23
KRT3P12035 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms