Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
UBCP0CG48 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC13.78□□□□□ -0.2
UBCP0CG48 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBCP0CG48 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBCP0CG48 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBCP0CG48 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
UBCP0CG48 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
UBCP0CG48 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBCP0CG48 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC13.78□□□□□ -0.2
UBCP0CG48 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
UBCP0CG48 PTMS-202ENST00000389462 773 ntTSL 2 BASIC13.78□□□□□ -0.2
UBCP0CG48 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
UBCP0CG48 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC13.78□□□□□ -0.2
UBCP0CG48 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC13.78□□□□□ -0.2
UBCP0CG48 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC13.78□□□□□ -0.2
UBCP0CG48 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC13.78□□□□□ -0.2
UBCP0CG48 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC13.78□□□□□ -0.2
UBCP0CG48 NAA38-207ENST00000576861 556 ntTSL 3 BASIC13.78□□□□□ -0.2
UBCP0CG48 AC026120.1-201ENST00000611536 926 ntBASIC13.78□□□□□ -0.2
UBCP0CG48 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBCP0CG48 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.78□□□□□ -0.2
UBCP0CG48 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13.78□□□□□ -0.2
UBCP0CG48 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.78□□□□□ -0.2
UBCP0CG48 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC13.78□□□□□ -0.2
UBCP0CG48 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBCP0CG48 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC13.78□□□□□ -0.2
UBCP0CG48 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
UBCP0CG48 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBCP0CG48 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBCP0CG48 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.78□□□□□ -0.2
UBCP0CG48 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBCP0CG48 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBCP0CG48 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.78□□□□□ -0.2
UBCP0CG48 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBCP0CG48 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.78□□□□□ -0.2
UBCP0CG48 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
UBCP0CG48 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.78□□□□□ -0.2
UBCP0CG48 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.78□□□□□ -0.2
UBCP0CG48 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
UBCP0CG48 AC091951.1-201ENST00000512854 2465 ntBASIC13.78□□□□□ -0.2
UBCP0CG48 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
UBCP0CG48 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.2
UBCP0CG48 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.2
UBCP0CG48 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.77□□□□□ -0.2
UBCP0CG48 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
UBCP0CG48 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
UBCP0CG48 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.77□□□□□ -0.2
UBCP0CG48 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
UBCP0CG48 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
UBCP0CG48 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.2
UBCP0CG48 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UBCP0CG48 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UBCP0CG48 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
UBCP0CG48 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UBCP0CG48 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UBCP0CG48 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UBCP0CG48 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
UBCP0CG48 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC13.77□□□□□ -0.21
UBCP0CG48 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UBCP0CG48 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
UBCP0CG48 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
UBCP0CG48 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
UBCP0CG48 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC13.77□□□□□ -0.21
UBCP0CG48 SPCS2P4-201ENST00000436160 681 ntBASIC13.77□□□□□ -0.21
UBCP0CG48 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
UBCP0CG48 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC13.77□□□□□ -0.21
UBCP0CG48 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC13.77□□□□□ -0.21
UBCP0CG48 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC13.77□□□□□ -0.21
UBCP0CG48 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
UBCP0CG48 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UBCP0CG48 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
UBCP0CG48 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC13.77□□□□□ -0.21
UBCP0CG48 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.77□□□□□ -0.21
UBCP0CG48 MAX-210ENST00000555419 765 ntTSL 5 BASIC13.77□□□□□ -0.21
UBCP0CG48 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC13.77□□□□□ -0.21
UBCP0CG48 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC13.77□□□□□ -0.21
UBCP0CG48 AGAP7P-201ENST00000582299 2062 ntBASIC13.77□□□□□ -0.21
UBCP0CG48 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.77□□□□□ -0.21
UBCP0CG48 PIN1-206ENST00000587625 878 ntTSL 2 BASIC13.77□□□□□ -0.21
UBCP0CG48 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
UBCP0CG48 LINC00528-201ENST00000600723 2160 ntBASIC13.77□□□□□ -0.21
UBCP0CG48 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.77□□□□□ -0.21
UBCP0CG48 AGAP14-201ENST00000624701 2060 ntBASIC13.77□□□□□ -0.21
UBCP0CG48 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.77□□□□□ -0.21
UBCP0CG48 AC092902.6-201ENST00000641783 218 ntBASIC13.77□□□□□ -0.21
UBCP0CG48 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.77□□□□□ -0.21
UBCP0CG48 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.77□□□□□ -0.21
UBCP0CG48 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UBCP0CG48 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UBCP0CG48 AC139749.1-202ENST00000617529 3139 ntBASIC13.77□□□□□ -0.21
UBCP0CG48 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
UBCP0CG48 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UBCP0CG48 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
UBCP0CG48 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
UBCP0CG48 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
UBCP0CG48 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
UBCP0CG48 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
UBCP0CG48 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
UBCP0CG48 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.76□□□□□ -0.21
UBCP0CG48 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms