Protein–RNA interactions for Protein: P09110

ACAA1, 3-ketoacyl-CoA thiolase, peroxisomal, humanhuman

Predicted RBP Predictions only

Length 424 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACAA1P09110 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC13.49□□□□□ -0.25
ACAA1P09110 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ACAA1P09110 LINC00628-201ENST00000628516 1289 ntBASIC13.49□□□□□ -0.25
ACAA1P09110 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.49□□□□□ -0.25
ACAA1P09110 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.49□□□□□ -0.25
ACAA1P09110 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
ACAA1P09110 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ACAA1P09110 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.49□□□□□ -0.25
ACAA1P09110 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ACAA1P09110 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ACAA1P09110 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
ACAA1P09110 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ACAA1P09110 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ACAA1P09110 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
ACAA1P09110 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
ACAA1P09110 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
ACAA1P09110 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ACAA1P09110 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
ACAA1P09110 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC13.49□□□□□ -0.25
ACAA1P09110 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ACAA1P09110 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ACAA1P09110 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13.48□□□□□ -0.25
ACAA1P09110 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ACAA1P09110 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ACAA1P09110 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
ACAA1P09110 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.48□□□□□ -0.25
ACAA1P09110 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ACAA1P09110 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
ACAA1P09110 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ACAA1P09110 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
ACAA1P09110 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ACAA1P09110 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.48□□□□□ -0.25
ACAA1P09110 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
ACAA1P09110 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
ACAA1P09110 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
ACAA1P09110 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.48□□□□□ -0.25
ACAA1P09110 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
ACAA1P09110 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ACAA1P09110 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ACAA1P09110 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ACAA1P09110 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ACAA1P09110 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ACAA1P09110 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ACAA1P09110 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
ACAA1P09110 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
ACAA1P09110 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
ACAA1P09110 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
ACAA1P09110 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ACAA1P09110 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC13.48□□□□□ -0.25
ACAA1P09110 AC105021.1-202ENST00000570572 669 ntBASIC13.48□□□□□ -0.25
ACAA1P09110 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.48□□□□□ -0.25
ACAA1P09110 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.48□□□□□ -0.25
ACAA1P09110 MIR4313-201ENST00000580760 101 ntBASIC13.48□□□□□ -0.25
ACAA1P09110 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ACAA1P09110 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC13.48□□□□□ -0.25
ACAA1P09110 AC003101.2-201ENST00000612557 442 ntBASIC13.48□□□□□ -0.25
ACAA1P09110 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ACAA1P09110 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.48□□□□□ -0.25
ACAA1P09110 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
ACAA1P09110 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ACAA1P09110 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.48□□□□□ -0.25
ACAA1P09110 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
ACAA1P09110 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
ACAA1P09110 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC13.48□□□□□ -0.25
ACAA1P09110 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
ACAA1P09110 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ACAA1P09110 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ACAA1P09110 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
ACAA1P09110 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
ACAA1P09110 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC13.48□□□□□ -0.25
ACAA1P09110 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
ACAA1P09110 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ACAA1P09110 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.47□□□□□ -0.25
ACAA1P09110 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
ACAA1P09110 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC13.47□□□□□ -0.25
ACAA1P09110 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC13.47□□□□□ -0.25
ACAA1P09110 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ACAA1P09110 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC13.47□□□□□ -0.25
ACAA1P09110 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ACAA1P09110 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.47□□□□□ -0.25
ACAA1P09110 AC007326.2-201ENST00000624224 7579 ntBASIC13.47□□□□□ -0.25
ACAA1P09110 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
ACAA1P09110 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ACAA1P09110 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
ACAA1P09110 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.47□□□□□ -0.25
ACAA1P09110 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ACAA1P09110 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ACAA1P09110 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.47□□□□□ -0.25
ACAA1P09110 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC13.47□□□□□ -0.25
ACAA1P09110 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ACAA1P09110 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
ACAA1P09110 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
ACAA1P09110 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
ACAA1P09110 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ACAA1P09110 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ACAA1P09110 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ACAA1P09110 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
ACAA1P09110 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ACAA1P09110 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC13.47□□□□□ -0.25
ACAA1P09110 RBM39-205ENST00000397370 612 ntTSL 2 BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms