Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 FADS2-215ENST00000574708 385 ntTSL 3 BASIC16.38■□□□□ 0.21
RB1P06400 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RB1P06400 SPCS2P2-201ENST00000603270 608 ntBASIC16.38■□□□□ 0.21
RB1P06400 AL023803.2-201ENST00000620080 638 ntBASIC16.38■□□□□ 0.21
RB1P06400 AC100757.4-201ENST00000626934 759 ntBASIC16.38■□□□□ 0.21
RB1P06400 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RB1P06400 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RB1P06400 PCDHA12-202ENST00000613593 2588 ntBASIC16.38■□□□□ 0.21
RB1P06400 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RB1P06400 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
RB1P06400 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
RB1P06400 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC16.38■□□□□ 0.21
RB1P06400 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RB1P06400 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.38■□□□□ 0.21
RB1P06400 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC16.38■□□□□ 0.21
RB1P06400 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RB1P06400 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.38■□□□□ 0.21
RB1P06400 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RB1P06400 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RB1P06400 AC022211.2-201ENST00000585075 2527 ntBASIC16.38■□□□□ 0.21
RB1P06400 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
RB1P06400 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
RB1P06400 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
RB1P06400 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RB1P06400 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
RB1P06400 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RB1P06400 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC16.37■□□□□ 0.21
RB1P06400 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.37■□□□□ 0.21
RB1P06400 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
RB1P06400 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RB1P06400 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC16.37■□□□□ 0.21
RB1P06400 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC16.37■□□□□ 0.21
RB1P06400 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
RB1P06400 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
RB1P06400 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC16.37■□□□□ 0.21
RB1P06400 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC16.37■□□□□ 0.21
RB1P06400 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC16.37■□□□□ 0.21
RB1P06400 SUPT4H1P2-201ENST00000501248 353 ntBASIC16.37■□□□□ 0.21
RB1P06400 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC16.37■□□□□ 0.21
RB1P06400 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC16.37■□□□□ 0.21
RB1P06400 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC16.37■□□□□ 0.21
RB1P06400 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC16.37■□□□□ 0.21
RB1P06400 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC16.37■□□□□ 0.21
RB1P06400 RN7SL774P-201ENST00000577467 290 ntBASIC16.37■□□□□ 0.21
RB1P06400 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC16.37■□□□□ 0.21
RB1P06400 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC16.37■□□□□ 0.21
RB1P06400 AL353726.2-201ENST00000623259 884 ntBASIC16.37■□□□□ 0.21
RB1P06400 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC16.37■□□□□ 0.21
RB1P06400 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RB1P06400 CROCCP1-201ENST00000426910 5675 ntBASIC16.37■□□□□ 0.21
RB1P06400 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
RB1P06400 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RB1P06400 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.37■□□□□ 0.21
RB1P06400 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RB1P06400 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RB1P06400 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
RB1P06400 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
RB1P06400 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RB1P06400 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RB1P06400 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RB1P06400 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RB1P06400 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.37■□□□□ 0.21
RB1P06400 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RB1P06400 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RB1P06400 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
RB1P06400 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
RB1P06400 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RB1P06400 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.36■□□□□ 0.21
RB1P06400 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RB1P06400 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RB1P06400 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RB1P06400 FER1L4-210ENST00000615531 5998 ntBASIC16.36■□□□□ 0.21
RB1P06400 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RB1P06400 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RB1P06400 AC007787.1-201ENST00000588095 1583 ntBASIC16.36■□□□□ 0.21
RB1P06400 AC106886.4-201ENST00000623557 2502 ntBASIC16.36■□□□□ 0.21
RB1P06400 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RB1P06400 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RB1P06400 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC16.36■□□□□ 0.21
RB1P06400 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC16.36■□□□□ 0.21
RB1P06400 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC16.36■□□□□ 0.21
RB1P06400 RGS5-214ENST00000429865 754 ntTSL 3 BASIC16.36■□□□□ 0.21
RB1P06400 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC16.36■□□□□ 0.21
RB1P06400 FTLP1-201ENST00000449155 526 ntBASIC16.36■□□□□ 0.21
RB1P06400 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
RB1P06400 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC16.36■□□□□ 0.21
RB1P06400 AC005740.2-201ENST00000511085 419 ntBASIC16.36■□□□□ 0.21
RB1P06400 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC16.36■□□□□ 0.21
RB1P06400 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC16.36■□□□□ 0.21
RB1P06400 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
RB1P06400 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
RB1P06400 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.36■□□□□ 0.21
RB1P06400 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.36■□□□□ 0.21
RB1P06400 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.36■□□□□ 0.21
RB1P06400 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
RB1P06400 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RB1P06400 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
RB1P06400 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RB1P06400 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RB1P06400 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms