Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
CAPNS1P04632 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CAPNS1P04632 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
CAPNS1P04632 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CAPNS1P04632 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CAPNS1P04632 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.58■□□□□ 0.09
CAPNS1P04632 AL031731.1-201ENST00000642131 2094 ntBASIC15.58■□□□□ 0.09
CAPNS1P04632 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CAPNS1P04632 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CAPNS1P04632 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CAPNS1P04632 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
CAPNS1P04632 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CAPNS1P04632 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CAPNS1P04632 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CAPNS1P04632 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CAPNS1P04632 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CAPNS1P04632 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CAPNS1P04632 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC15.58■□□□□ 0.08
CAPNS1P04632 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.58■□□□□ 0.08
CAPNS1P04632 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC15.58■□□□□ 0.08
CAPNS1P04632 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC15.58■□□□□ 0.08
CAPNS1P04632 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.58■□□□□ 0.08
CAPNS1P04632 TPRX2P-201ENST00000535362 881 ntBASIC15.58■□□□□ 0.08
CAPNS1P04632 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.58■□□□□ 0.08
CAPNS1P04632 MIR3615-201ENST00000581999 87 ntBASIC15.58■□□□□ 0.08
CAPNS1P04632 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CAPNS1P04632 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
CAPNS1P04632 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CAPNS1P04632 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CAPNS1P04632 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CAPNS1P04632 TOP3BP1-201ENST00000420768 1380 ntBASIC15.58■□□□□ 0.08
CAPNS1P04632 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CAPNS1P04632 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.58■□□□□ 0.08
CAPNS1P04632 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.58■□□□□ 0.08
CAPNS1P04632 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CAPNS1P04632 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CAPNS1P04632 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.58■□□□□ 0.08
CAPNS1P04632 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CAPNS1P04632 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CAPNS1P04632 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CAPNS1P04632 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CAPNS1P04632 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CAPNS1P04632 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.58■□□□□ 0.08
CAPNS1P04632 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
CAPNS1P04632 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CAPNS1P04632 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CAPNS1P04632 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.57■□□□□ 0.08
CAPNS1P04632 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CAPNS1P04632 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CAPNS1P04632 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
CAPNS1P04632 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CAPNS1P04632 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CAPNS1P04632 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CAPNS1P04632 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.57■□□□□ 0.08
CAPNS1P04632 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CAPNS1P04632 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CAPNS1P04632 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.57■□□□□ 0.08
CAPNS1P04632 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.57■□□□□ 0.08
CAPNS1P04632 LINC01101-201ENST00000622953 1884 ntBASIC15.57■□□□□ 0.08
CAPNS1P04632 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CAPNS1P04632 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
CAPNS1P04632 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
CAPNS1P04632 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CAPNS1P04632 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.57■□□□□ 0.08
CAPNS1P04632 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.57■□□□□ 0.08
CAPNS1P04632 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.57■□□□□ 0.08
CAPNS1P04632 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CAPNS1P04632 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CAPNS1P04632 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CAPNS1P04632 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CAPNS1P04632 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CAPNS1P04632 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.57■□□□□ 0.08
CAPNS1P04632 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
CAPNS1P04632 AC099336.1-201ENST00000417053 1171 ntBASIC15.57■□□□□ 0.08
CAPNS1P04632 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.57■□□□□ 0.08
CAPNS1P04632 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.57■□□□□ 0.08
CAPNS1P04632 AC099548.2-209ENST00000480264 625 ntBASIC15.57■□□□□ 0.08
CAPNS1P04632 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CAPNS1P04632 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
CAPNS1P04632 FTH1-202ENST00000526640 786 ntTSL 2 BASIC15.57■□□□□ 0.08
CAPNS1P04632 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CAPNS1P04632 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC15.57■□□□□ 0.08
CAPNS1P04632 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
CAPNS1P04632 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.57■□□□□ 0.08
CAPNS1P04632 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.57■□□□□ 0.08
CAPNS1P04632 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.57■□□□□ 0.08
CAPNS1P04632 AC093726.1-201ENST00000608064 963 ntBASIC15.57■□□□□ 0.08
CAPNS1P04632 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CAPNS1P04632 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC15.57■□□□□ 0.08
CAPNS1P04632 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CAPNS1P04632 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CAPNS1P04632 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.57■□□□□ 0.08
CAPNS1P04632 AC026748.1-201ENST00000624349 3251 ntBASIC15.57■□□□□ 0.08
CAPNS1P04632 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.57■□□□□ 0.08
CAPNS1P04632 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CAPNS1P04632 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CAPNS1P04632 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CAPNS1P04632 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.57■□□□□ 0.08
CAPNS1P04632 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.57■□□□□ 0.08
CAPNS1P04632 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms