Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
APOA1P02647 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOA1P02647 CDV3-207ENST00000508481 661 ntTSL 3 BASIC14.03□□□□□ -0.16
APOA1P02647 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.03□□□□□ -0.16
APOA1P02647 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC14.03□□□□□ -0.16
APOA1P02647 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
APOA1P02647 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC14.03□□□□□ -0.16
APOA1P02647 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOA1P02647 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOA1P02647 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
APOA1P02647 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOA1P02647 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
APOA1P02647 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.03□□□□□ -0.16
APOA1P02647 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
APOA1P02647 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.03□□□□□ -0.16
APOA1P02647 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOA1P02647 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC14.03□□□□□ -0.16
APOA1P02647 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
APOA1P02647 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.03□□□□□ -0.16
APOA1P02647 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
APOA1P02647 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.03□□□□□ -0.16
APOA1P02647 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
APOA1P02647 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC14.03□□□□□ -0.16
APOA1P02647 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
APOA1P02647 AL356585.2-201ENST00000625078 2396 ntBASIC14.03□□□□□ -0.16
APOA1P02647 DGCR9-201ENST00000609630 2415 ntBASIC14.03□□□□□ -0.16
APOA1P02647 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOA1P02647 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.03□□□□□ -0.16
APOA1P02647 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.03□□□□□ -0.16
APOA1P02647 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
APOA1P02647 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
APOA1P02647 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOA1P02647 CSPG4P11-201ENST00000560634 4910 ntBASIC14.03□□□□□ -0.16
APOA1P02647 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
APOA1P02647 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
APOA1P02647 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
APOA1P02647 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
APOA1P02647 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
APOA1P02647 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
APOA1P02647 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
APOA1P02647 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
APOA1P02647 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
APOA1P02647 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
APOA1P02647 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
APOA1P02647 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
APOA1P02647 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.02□□□□□ -0.16
APOA1P02647 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.02□□□□□ -0.16
APOA1P02647 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.02□□□□□ -0.16
APOA1P02647 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
APOA1P02647 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.02□□□□□ -0.16
APOA1P02647 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
APOA1P02647 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
APOA1P02647 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.02□□□□□ -0.16
APOA1P02647 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
APOA1P02647 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
APOA1P02647 TERF1P1-201ENST00000311003 1181 ntBASIC14.02□□□□□ -0.17
APOA1P02647 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
APOA1P02647 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
APOA1P02647 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
APOA1P02647 HCG4-201ENST00000418983 998 ntBASIC14.02□□□□□ -0.17
APOA1P02647 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC14.02□□□□□ -0.17
APOA1P02647 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
APOA1P02647 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.17
APOA1P02647 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
APOA1P02647 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
APOA1P02647 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC14.02□□□□□ -0.17
APOA1P02647 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC14.02□□□□□ -0.17
APOA1P02647 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
APOA1P02647 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC14.02□□□□□ -0.17
APOA1P02647 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.02□□□□□ -0.17
APOA1P02647 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
APOA1P02647 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC14.02□□□□□ -0.17
APOA1P02647 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
APOA1P02647 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC14.02□□□□□ -0.17
APOA1P02647 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
APOA1P02647 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
APOA1P02647 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
APOA1P02647 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
APOA1P02647 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
APOA1P02647 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC14.02□□□□□ -0.17
APOA1P02647 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
APOA1P02647 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
APOA1P02647 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC14.02□□□□□ -0.17
APOA1P02647 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.02□□□□□ -0.17
APOA1P02647 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
APOA1P02647 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
APOA1P02647 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC14.01□□□□□ -0.17
APOA1P02647 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOA1P02647 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOA1P02647 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
APOA1P02647 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
APOA1P02647 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC14.01□□□□□ -0.17
APOA1P02647 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.01□□□□□ -0.17
APOA1P02647 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
APOA1P02647 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC14.01□□□□□ -0.17
APOA1P02647 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOA1P02647 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOA1P02647 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOA1P02647 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOA1P02647 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms