Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.51■□□□□ 0.23
RTN3O95197 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RTN3O95197 FAM86LP-201ENST00000478302 853 ntBASIC16.51■□□□□ 0.23
RTN3O95197 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC16.51■□□□□ 0.23
RTN3O95197 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.51■□□□□ 0.23
RTN3O95197 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RTN3O95197 POLE2-203ENST00000553805 496 ntTSL 2 BASIC16.51■□□□□ 0.23
RTN3O95197 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RTN3O95197 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC16.51■□□□□ 0.23
RTN3O95197 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.51■□□□□ 0.23
RTN3O95197 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RTN3O95197 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.51■□□□□ 0.23
RTN3O95197 CTBP2P3-201ENST00000585629 1255 ntBASIC16.51■□□□□ 0.23
RTN3O95197 MIR8072-201ENST00000614241 80 ntBASIC16.51■□□□□ 0.23
RTN3O95197 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
RTN3O95197 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
RTN3O95197 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RTN3O95197 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
RTN3O95197 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RTN3O95197 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RTN3O95197 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.51■□□□□ 0.23
RTN3O95197 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
RTN3O95197 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RTN3O95197 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.51■□□□□ 0.23
RTN3O95197 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RTN3O95197 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.51■□□□□ 0.23
RTN3O95197 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RTN3O95197 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RTN3O95197 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RTN3O95197 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
RTN3O95197 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RTN3O95197 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RTN3O95197 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
RTN3O95197 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RTN3O95197 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
RTN3O95197 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
RTN3O95197 GOLGA8DP-202ENST00000341390 2184 ntBASIC16.5■□□□□ 0.23
RTN3O95197 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RTN3O95197 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.5■□□□□ 0.23
RTN3O95197 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RTN3O95197 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.5■□□□□ 0.23
RTN3O95197 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RTN3O95197 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RTN3O95197 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.5■□□□□ 0.23
RTN3O95197 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
RTN3O95197 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
RTN3O95197 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RTN3O95197 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RTN3O95197 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RTN3O95197 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC16.5■□□□□ 0.23
RTN3O95197 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RTN3O95197 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
RTN3O95197 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC16.5■□□□□ 0.23
RTN3O95197 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.5■□□□□ 0.23
RTN3O95197 AL442647.2-201ENST00000429864 857 ntBASIC16.5■□□□□ 0.23
RTN3O95197 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.5■□□□□ 0.23
RTN3O95197 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.5■□□□□ 0.23
RTN3O95197 RPL13AP25-201ENST00000484130 612 ntBASIC16.5■□□□□ 0.23
RTN3O95197 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
RTN3O95197 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.5■□□□□ 0.23
RTN3O95197 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.5■□□□□ 0.23
RTN3O95197 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC16.5■□□□□ 0.23
RTN3O95197 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RTN3O95197 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC16.5■□□□□ 0.23
RTN3O95197 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.5■□□□□ 0.23
RTN3O95197 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RTN3O95197 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.5■□□□□ 0.23
RTN3O95197 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RTN3O95197 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
RTN3O95197 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
RTN3O95197 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RTN3O95197 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
RTN3O95197 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RTN3O95197 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC16.5■□□□□ 0.23
RTN3O95197 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
RTN3O95197 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
RTN3O95197 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
RTN3O95197 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RTN3O95197 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RTN3O95197 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RTN3O95197 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RTN3O95197 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RTN3O95197 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RTN3O95197 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RTN3O95197 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RTN3O95197 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
RTN3O95197 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
RTN3O95197 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
RTN3O95197 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RTN3O95197 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
RTN3O95197 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RTN3O95197 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RTN3O95197 AL133267.1-201ENST00000398220 340 ntBASIC16.49■□□□□ 0.23
RTN3O95197 NEU3-203ENST00000529024 581 ntTSL 3 BASIC16.49■□□□□ 0.23
RTN3O95197 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.49■□□□□ 0.23
RTN3O95197 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.49■□□□□ 0.23
RTN3O95197 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.49■□□□□ 0.23
RTN3O95197 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
RTN3O95197 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.49■□□□□ 0.23
RTN3O95197 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms