Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NDUFS3O75489 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NDUFS3O75489 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.63■□□□□ 0.09
NDUFS3O75489 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NDUFS3O75489 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
NDUFS3O75489 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NDUFS3O75489 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
NDUFS3O75489 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NDUFS3O75489 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NDUFS3O75489 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC15.63■□□□□ 0.09
NDUFS3O75489 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.63■□□□□ 0.09
NDUFS3O75489 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.63■□□□□ 0.09
NDUFS3O75489 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.63■□□□□ 0.09
NDUFS3O75489 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC15.63■□□□□ 0.09
NDUFS3O75489 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.63■□□□□ 0.09
NDUFS3O75489 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.63■□□□□ 0.09
NDUFS3O75489 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
NDUFS3O75489 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.63■□□□□ 0.09
NDUFS3O75489 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.63■□□□□ 0.09
NDUFS3O75489 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.63■□□□□ 0.09
NDUFS3O75489 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NDUFS3O75489 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.63■□□□□ 0.09
NDUFS3O75489 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
NDUFS3O75489 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NDUFS3O75489 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC15.63■□□□□ 0.09
NDUFS3O75489 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NDUFS3O75489 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NDUFS3O75489 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NDUFS3O75489 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NDUFS3O75489 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
NDUFS3O75489 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.63■□□□□ 0.09
NDUFS3O75489 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NDUFS3O75489 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NDUFS3O75489 AC138035.3-201ENST00000622706 2791 ntBASIC15.63■□□□□ 0.09
NDUFS3O75489 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NDUFS3O75489 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
NDUFS3O75489 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.63■□□□□ 0.09
NDUFS3O75489 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NDUFS3O75489 AL109954.1-202ENST00000564051 2148 ntBASIC15.62■□□□□ 0.09
NDUFS3O75489 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NDUFS3O75489 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NDUFS3O75489 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NDUFS3O75489 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NDUFS3O75489 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.62■□□□□ 0.09
NDUFS3O75489 C18orf15-201ENST00000623680 2534 ntBASIC15.62■□□□□ 0.09
NDUFS3O75489 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NDUFS3O75489 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.62■□□□□ 0.09
NDUFS3O75489 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.62■□□□□ 0.09
NDUFS3O75489 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.62■□□□□ 0.09
NDUFS3O75489 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.62■□□□□ 0.09
NDUFS3O75489 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.62■□□□□ 0.09
NDUFS3O75489 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.62■□□□□ 0.09
NDUFS3O75489 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.62■□□□□ 0.09
NDUFS3O75489 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.62■□□□□ 0.09
NDUFS3O75489 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC15.62■□□□□ 0.09
NDUFS3O75489 AL512361.1-201ENST00000554200 418 ntBASIC15.62■□□□□ 0.09
NDUFS3O75489 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.62■□□□□ 0.09
NDUFS3O75489 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.62■□□□□ 0.09
NDUFS3O75489 AC025048.3-201ENST00000590609 569 ntBASIC15.62■□□□□ 0.09
NDUFS3O75489 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.62■□□□□ 0.09
NDUFS3O75489 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.62■□□□□ 0.09
NDUFS3O75489 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC15.62■□□□□ 0.09
NDUFS3O75489 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.62■□□□□ 0.09
NDUFS3O75489 AC005702.4-201ENST00000618393 416 ntBASIC15.62■□□□□ 0.09
NDUFS3O75489 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NDUFS3O75489 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
NDUFS3O75489 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NDUFS3O75489 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NDUFS3O75489 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.62■□□□□ 0.09
NDUFS3O75489 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
NDUFS3O75489 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
NDUFS3O75489 AC112693.3-201ENST00000624819 1983 ntBASIC15.62■□□□□ 0.09
NDUFS3O75489 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.62■□□□□ 0.09
NDUFS3O75489 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NDUFS3O75489 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.62■□□□□ 0.09
NDUFS3O75489 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NDUFS3O75489 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
NDUFS3O75489 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NDUFS3O75489 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NDUFS3O75489 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NDUFS3O75489 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.61■□□□□ 0.09
NDUFS3O75489 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.61■□□□□ 0.09
NDUFS3O75489 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
NDUFS3O75489 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.61■□□□□ 0.09
NDUFS3O75489 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
NDUFS3O75489 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.61■□□□□ 0.09
NDUFS3O75489 Z97205.2-201ENST00000564697 1639 ntBASIC15.61■□□□□ 0.09
NDUFS3O75489 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NDUFS3O75489 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NDUFS3O75489 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NDUFS3O75489 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
NDUFS3O75489 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NDUFS3O75489 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
NDUFS3O75489 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.61■□□□□ 0.09
NDUFS3O75489 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.61■□□□□ 0.09
NDUFS3O75489 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.61■□□□□ 0.09
NDUFS3O75489 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.61■□□□□ 0.09
NDUFS3O75489 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.61■□□□□ 0.09
NDUFS3O75489 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NDUFS3O75489 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms