Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
USH2AO75445 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
USH2AO75445 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
USH2AO75445 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
USH2AO75445 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
USH2AO75445 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC6.79□□□□□ -1.32
USH2AO75445 RN7SL494P-201ENST00000461517 304 ntBASIC6.79□□□□□ -1.32
USH2AO75445 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC6.79□□□□□ -1.32
USH2AO75445 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
USH2AO75445 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC6.79□□□□□ -1.32
USH2AO75445 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC6.79□□□□□ -1.32
USH2AO75445 SRP14-204ENST00000558720 780 ntTSL 2 BASIC6.79□□□□□ -1.32
USH2AO75445 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC6.79□□□□□ -1.32
USH2AO75445 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC6.79□□□□□ -1.32
USH2AO75445 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC6.79□□□□□ -1.32
USH2AO75445 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
USH2AO75445 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC6.79□□□□□ -1.32
USH2AO75445 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
USH2AO75445 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC6.79□□□□□ -1.32
USH2AO75445 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
USH2AO75445 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
USH2AO75445 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC6.78□□□□□ -1.32
USH2AO75445 MRPS28-201ENST00000276585 850 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
USH2AO75445 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
USH2AO75445 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
USH2AO75445 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
USH2AO75445 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC6.78□□□□□ -1.32
USH2AO75445 AC026470.1-201ENST00000478038 846 ntBASIC6.78□□□□□ -1.32
USH2AO75445 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC6.78□□□□□ -1.32
USH2AO75445 AC140847.2-201ENST00000545923 501 ntTSL 3 BASIC6.78□□□□□ -1.32
USH2AO75445 AL590235.1-201ENST00000564650 861 ntBASIC6.78□□□□□ -1.32
USH2AO75445 MT3-203ENST00000565838 421 ntTSL 3 BASIC6.78□□□□□ -1.32
USH2AO75445 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
USH2AO75445 AC138466.5-201ENST00000624002 808 ntBASIC6.78□□□□□ -1.32
USH2AO75445 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
USH2AO75445 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.78□□□□□ -1.32
USH2AO75445 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
USH2AO75445 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
USH2AO75445 AC144522.1-201ENST00000625111 1658 ntBASIC6.78□□□□□ -1.32
USH2AO75445 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
USH2AO75445 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC6.78□□□□□ -1.32
USH2AO75445 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
USH2AO75445 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
USH2AO75445 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
USH2AO75445 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC6.78□□□□□ -1.32
USH2AO75445 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
USH2AO75445 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
USH2AO75445 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC6.78□□□□□ -1.32
USH2AO75445 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC6.78□□□□□ -1.32
USH2AO75445 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC6.78□□□□□ -1.32
USH2AO75445 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC6.78□□□□□ -1.32
USH2AO75445 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
USH2AO75445 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC6.78□□□□□ -1.32
USH2AO75445 GGT3P-204ENST00000453783 1664 ntBASIC6.78□□□□□ -1.32
USH2AO75445 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC6.78□□□□□ -1.32
USH2AO75445 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
USH2AO75445 FAM58BP-201ENST00000439056 645 ntBASIC6.78□□□□□ -1.32
USH2AO75445 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC6.78□□□□□ -1.32
USH2AO75445 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC6.78□□□□□ -1.32
USH2AO75445 STAU2-212ENST00000521419 972 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
USH2AO75445 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC6.78□□□□□ -1.32
USH2AO75445 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC6.78□□□□□ -1.32
USH2AO75445 RN7SL470P-201ENST00000583069 259 ntBASIC6.78□□□□□ -1.32
USH2AO75445 AC022966.2-201ENST00000587434 367 ntBASIC6.78□□□□□ -1.32
USH2AO75445 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC6.78□□□□□ -1.32
USH2AO75445 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC6.78□□□□□ -1.32
USH2AO75445 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
USH2AO75445 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC6.78□□□□□ -1.32
USH2AO75445 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
USH2AO75445 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC6.78□□□□□ -1.32
USH2AO75445 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
USH2AO75445 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC6.78□□□□□ -1.32
USH2AO75445 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
USH2AO75445 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
USH2AO75445 ACTBP8-201ENST00000403258 1108 ntBASIC6.78□□□□□ -1.32
USH2AO75445 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC6.78□□□□□ -1.32
USH2AO75445 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
USH2AO75445 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC6.78□□□□□ -1.32
USH2AO75445 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC6.78□□□□□ -1.32
USH2AO75445 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
USH2AO75445 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
USH2AO75445 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC6.78□□□□□ -1.32
USH2AO75445 SRP19-208ENST00000621420 1270 ntTSL 3 BASIC6.78□□□□□ -1.32
USH2AO75445 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC6.78□□□□□ -1.32
USH2AO75445 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC6.78□□□□□ -1.32
USH2AO75445 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
USH2AO75445 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
USH2AO75445 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
USH2AO75445 AC022188.1-201ENST00000620960 1664 ntBASIC6.78□□□□□ -1.32
USH2AO75445 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
USH2AO75445 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC6.78□□□□□ -1.32
USH2AO75445 PHF5A-201ENST00000216252 1086 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
USH2AO75445 BAK1P1-201ENST00000317045 636 ntBASIC6.78□□□□□ -1.32
USH2AO75445 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
USH2AO75445 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC6.78□□□□□ -1.32
USH2AO75445 AC092638.2-201ENST00000441105 947 ntBASIC6.78□□□□□ -1.32
USH2AO75445 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC6.78□□□□□ -1.32
USH2AO75445 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
USH2AO75445 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC6.78□□□□□ -1.32
USH2AO75445 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms