Protein–RNA interactions for Protein: O43861

ATP9B, Probable phospholipid-transporting ATPase IIB, humanhuman

Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP9BO43861 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATP9BO43861 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ATP9BO43861 KRT8P37-201ENST00000451609 1420 ntBASIC16.26■□□□□ 0.19
ATP9BO43861 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATP9BO43861 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ATP9BO43861 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ATP9BO43861 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.26■□□□□ 0.19
ATP9BO43861 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATP9BO43861 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ATP9BO43861 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATP9BO43861 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.26■□□□□ 0.19
ATP9BO43861 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.26■□□□□ 0.19
ATP9BO43861 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATP9BO43861 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ATP9BO43861 BNIP3P1-202ENST00000550043 1585 ntBASIC16.26■□□□□ 0.19
ATP9BO43861 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATP9BO43861 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
ATP9BO43861 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
ATP9BO43861 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
ATP9BO43861 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ATP9BO43861 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATP9BO43861 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.25■□□□□ 0.19
ATP9BO43861 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.25■□□□□ 0.19
ATP9BO43861 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ATP9BO43861 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.25■□□□□ 0.19
ATP9BO43861 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.25■□□□□ 0.19
ATP9BO43861 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATP9BO43861 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.25■□□□□ 0.19
ATP9BO43861 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ATP9BO43861 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.25■□□□□ 0.19
ATP9BO43861 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.25■□□□□ 0.19
ATP9BO43861 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ATP9BO43861 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.25■□□□□ 0.19
ATP9BO43861 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATP9BO43861 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ATP9BO43861 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATP9BO43861 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ATP9BO43861 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ATP9BO43861 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.25■□□□□ 0.19
ATP9BO43861 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.25■□□□□ 0.19
ATP9BO43861 CRB3P1-201ENST00000449338 276 ntBASIC16.25■□□□□ 0.19
ATP9BO43861 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.25■□□□□ 0.19
ATP9BO43861 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.25■□□□□ 0.19
ATP9BO43861 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.25■□□□□ 0.19
ATP9BO43861 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.25■□□□□ 0.19
ATP9BO43861 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
ATP9BO43861 AC025048.3-201ENST00000590609 569 ntBASIC16.25■□□□□ 0.19
ATP9BO43861 AC004233.3-201ENST00000607794 1269 ntBASIC16.25■□□□□ 0.19
ATP9BO43861 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.25■□□□□ 0.19
ATP9BO43861 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATP9BO43861 AC005702.4-201ENST00000618393 416 ntBASIC16.25■□□□□ 0.19
ATP9BO43861 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.25■□□□□ 0.19
ATP9BO43861 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ATP9BO43861 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATP9BO43861 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.25■□□□□ 0.19
ATP9BO43861 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATP9BO43861 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.25■□□□□ 0.19
ATP9BO43861 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
ATP9BO43861 AC073347.1-201ENST00000421633 2643 ntBASIC16.25■□□□□ 0.19
ATP9BO43861 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
ATP9BO43861 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ATP9BO43861 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.25■□□□□ 0.19
ATP9BO43861 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATP9BO43861 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
ATP9BO43861 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.25■□□□□ 0.19
ATP9BO43861 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.25■□□□□ 0.19
ATP9BO43861 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
ATP9BO43861 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
ATP9BO43861 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATP9BO43861 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.25■□□□□ 0.19
ATP9BO43861 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
ATP9BO43861 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATP9BO43861 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
ATP9BO43861 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.24■□□□□ 0.19
ATP9BO43861 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ATP9BO43861 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.24■□□□□ 0.19
ATP9BO43861 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATP9BO43861 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ATP9BO43861 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATP9BO43861 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ATP9BO43861 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
ATP9BO43861 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATP9BO43861 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATP9BO43861 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.24■□□□□ 0.19
ATP9BO43861 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATP9BO43861 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATP9BO43861 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ATP9BO43861 HCG24-202ENST00000414398 717 ntTSL 3 BASIC16.24■□□□□ 0.19
ATP9BO43861 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.24■□□□□ 0.19
ATP9BO43861 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.24■□□□□ 0.19
ATP9BO43861 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.24■□□□□ 0.19
ATP9BO43861 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.24■□□□□ 0.19
ATP9BO43861 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
ATP9BO43861 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.24■□□□□ 0.19
ATP9BO43861 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.24■□□□□ 0.19
ATP9BO43861 AC104794.3-201ENST00000566840 1248 ntBASIC16.24■□□□□ 0.19
ATP9BO43861 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.24■□□□□ 0.19
ATP9BO43861 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ATP9BO43861 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.24■□□□□ 0.19
ATP9BO43861 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms