Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RNF13O43567 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RNF13O43567 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
RNF13O43567 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RNF13O43567 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RNF13O43567 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.31□□□□□ -0.12
RNF13O43567 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RNF13O43567 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RNF13O43567 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RNF13O43567 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RNF13O43567 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RNF13O43567 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RNF13O43567 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RNF13O43567 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
RNF13O43567 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RNF13O43567 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RNF13O43567 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.3□□□□□ -0.12
RNF13O43567 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RNF13O43567 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
RNF13O43567 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RNF13O43567 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RNF13O43567 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RNF13O43567 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RNF13O43567 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RNF13O43567 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.3□□□□□ -0.12
RNF13O43567 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.3□□□□□ -0.12
RNF13O43567 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RNF13O43567 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.3□□□□□ -0.12
RNF13O43567 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.3□□□□□ -0.12
RNF13O43567 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
RNF13O43567 AC093520.2-201ENST00000561830 333 ntBASIC14.3□□□□□ -0.12
RNF13O43567 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.3□□□□□ -0.12
RNF13O43567 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.3□□□□□ -0.12
RNF13O43567 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.3□□□□□ -0.12
RNF13O43567 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.3□□□□□ -0.12
RNF13O43567 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
RNF13O43567 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.3□□□□□ -0.12
RNF13O43567 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
RNF13O43567 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RNF13O43567 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
RNF13O43567 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.3□□□□□ -0.12
RNF13O43567 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
RNF13O43567 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
RNF13O43567 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
RNF13O43567 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RNF13O43567 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RNF13O43567 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.3□□□□□ -0.12
RNF13O43567 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RNF13O43567 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.3□□□□□ -0.12
RNF13O43567 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.3□□□□□ -0.12
RNF13O43567 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
RNF13O43567 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF13O43567 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
RNF13O43567 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF13O43567 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.29□□□□□ -0.12
RNF13O43567 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
RNF13O43567 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.29□□□□□ -0.12
RNF13O43567 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
RNF13O43567 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.29□□□□□ -0.12
RNF13O43567 AC112693.3-201ENST00000624819 1983 ntBASIC14.29□□□□□ -0.12
RNF13O43567 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF13O43567 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.29□□□□□ -0.12
RNF13O43567 SNX18-202ENST00000343017 3140 ntBASIC14.29□□□□□ -0.12
RNF13O43567 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
RNF13O43567 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
RNF13O43567 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF13O43567 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF13O43567 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF13O43567 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RNF13O43567 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
RNF13O43567 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.29□□□□□ -0.12
RNF13O43567 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF13O43567 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RNF13O43567 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RNF13O43567 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.29□□□□□ -0.12
RNF13O43567 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF13O43567 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.29□□□□□ -0.12
RNF13O43567 RPP21-221ENST00000428040 594 ntTSL 2 BASIC14.29□□□□□ -0.12
RNF13O43567 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF13O43567 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF13O43567 AC023141.5-201ENST00000458585 616 ntBASIC14.29□□□□□ -0.12
RNF13O43567 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.29□□□□□ -0.12
RNF13O43567 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC14.29□□□□□ -0.12
RNF13O43567 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
RNF13O43567 AC105021.1-202ENST00000570572 669 ntBASIC14.29□□□□□ -0.12
RNF13O43567 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.29□□□□□ -0.12
RNF13O43567 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF13O43567 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.29□□□□□ -0.12
RNF13O43567 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF13O43567 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF13O43567 CICP23-201ENST00000605013 2741 ntBASIC14.29□□□□□ -0.12
RNF13O43567 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RNF13O43567 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF13O43567 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF13O43567 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF13O43567 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF13O43567 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
RNF13O43567 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
RNF13O43567 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.29□□□□□ -0.12
RNF13O43567 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms