Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.72■□□□□ 0.11
SMAD6O43541 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.72■□□□□ 0.11
SMAD6O43541 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.72■□□□□ 0.11
SMAD6O43541 USP32P1-208ENST00000506594 1164 ntBASIC15.72■□□□□ 0.11
SMAD6O43541 TDH-203ENST00000531764 1110 ntBASIC15.72■□□□□ 0.11
SMAD6O43541 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC15.72■□□□□ 0.11
SMAD6O43541 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.72■□□□□ 0.11
SMAD6O43541 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.72■□□□□ 0.11
SMAD6O43541 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC15.72■□□□□ 0.11
SMAD6O43541 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
SMAD6O43541 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
SMAD6O43541 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SMAD6O43541 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SMAD6O43541 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SMAD6O43541 AL138799.1-201ENST00000448213 1675 ntBASIC15.72■□□□□ 0.11
SMAD6O43541 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.72■□□□□ 0.11
SMAD6O43541 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
SMAD6O43541 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SMAD6O43541 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SMAD6O43541 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SMAD6O43541 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SMAD6O43541 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.72■□□□□ 0.11
SMAD6O43541 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.72■□□□□ 0.11
SMAD6O43541 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SMAD6O43541 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
SMAD6O43541 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SMAD6O43541 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SMAD6O43541 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SMAD6O43541 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.71■□□□□ 0.11
SMAD6O43541 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
SMAD6O43541 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.71■□□□□ 0.11
SMAD6O43541 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SMAD6O43541 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
SMAD6O43541 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
SMAD6O43541 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
SMAD6O43541 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SMAD6O43541 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.71■□□□□ 0.11
SMAD6O43541 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SMAD6O43541 AC112492.5-201ENST00000421897 457 ntBASIC15.71■□□□□ 0.11
SMAD6O43541 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.71■□□□□ 0.11
SMAD6O43541 AC093433.1-201ENST00000458048 571 ntBASIC15.71■□□□□ 0.11
SMAD6O43541 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.71■□□□□ 0.11
SMAD6O43541 KRT17P8-201ENST00000540749 863 ntBASIC15.71■□□□□ 0.11
SMAD6O43541 HILS1-202ENST00000545329 423 ntBASIC15.71■□□□□ 0.11
SMAD6O43541 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SMAD6O43541 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SMAD6O43541 IFT20-206ENST00000578122 834 ntTSL 2 BASIC15.71■□□□□ 0.11
SMAD6O43541 IFT20-208ENST00000578985 831 ntTSL 3 BASIC15.71■□□□□ 0.11
SMAD6O43541 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
SMAD6O43541 AL162274.1-201ENST00000617191 1098 ntBASIC15.71■□□□□ 0.11
SMAD6O43541 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SMAD6O43541 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
SMAD6O43541 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.71■□□□□ 0.11
SMAD6O43541 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SMAD6O43541 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SMAD6O43541 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
SMAD6O43541 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.71■□□□□ 0.11
SMAD6O43541 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.71■□□□□ 0.11
SMAD6O43541 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SMAD6O43541 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SMAD6O43541 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.71■□□□□ 0.1
SMAD6O43541 AGER-206ENST00000375070 1463 ntTSL 5 BASIC15.71■□□□□ 0.1
SMAD6O43541 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
SMAD6O43541 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
SMAD6O43541 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
SMAD6O43541 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.1
SMAD6O43541 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
SMAD6O43541 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.7■□□□□ 0.1
SMAD6O43541 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SMAD6O43541 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.7■□□□□ 0.1
SMAD6O43541 AC020658.6-201ENST00000623564 1870 ntBASIC15.7■□□□□ 0.1
SMAD6O43541 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SMAD6O43541 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SMAD6O43541 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SMAD6O43541 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.7■□□□□ 0.1
SMAD6O43541 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SMAD6O43541 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SMAD6O43541 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
SMAD6O43541 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SMAD6O43541 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SMAD6O43541 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SMAD6O43541 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SMAD6O43541 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SMAD6O43541 OR8S1-201ENST00000310194 1080 ntBASIC15.7■□□□□ 0.1
SMAD6O43541 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.7■□□□□ 0.1
SMAD6O43541 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
SMAD6O43541 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SMAD6O43541 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SMAD6O43541 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
SMAD6O43541 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.7■□□□□ 0.1
SMAD6O43541 AP001582.1-201ENST00000525856 295 ntBASIC15.7■□□□□ 0.1
SMAD6O43541 SLC25A47P1-201ENST00000531577 414 ntBASIC15.7■□□□□ 0.1
SMAD6O43541 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.7■□□□□ 0.1
SMAD6O43541 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.7■□□□□ 0.1
SMAD6O43541 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.7■□□□□ 0.1
SMAD6O43541 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.7■□□□□ 0.1
SMAD6O43541 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.7■□□□□ 0.1
SMAD6O43541 AC015936.2-201ENST00000593177 259 ntBASIC15.7■□□□□ 0.1
SMAD6O43541 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC15.7■□□□□ 0.1
SMAD6O43541 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms