Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
FOXN1O15353 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
FOXN1O15353 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
FOXN1O15353 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
FOXN1O15353 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
FOXN1O15353 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
FOXN1O15353 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
FOXN1O15353 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
FOXN1O15353 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
FOXN1O15353 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
FOXN1O15353 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
FOXN1O15353 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
FOXN1O15353 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
FOXN1O15353 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC18.62■□□□□ 0.57
FOXN1O15353 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
FOXN1O15353 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
FOXN1O15353 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
FOXN1O15353 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC18.62■□□□□ 0.57
FOXN1O15353 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
FOXN1O15353 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC18.62■□□□□ 0.57
FOXN1O15353 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC18.62■□□□□ 0.57
FOXN1O15353 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
FOXN1O15353 PPOX-204ENST00000462866 473 ntTSL 5 BASIC18.62■□□□□ 0.57
FOXN1O15353 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC18.62■□□□□ 0.57
FOXN1O15353 GNRHR2-203ENST00000581100 1187 ntBASIC18.62■□□□□ 0.57
FOXN1O15353 AC024267.1-201ENST00000582320 895 ntBASIC18.62■□□□□ 0.57
FOXN1O15353 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC18.62■□□□□ 0.57
FOXN1O15353 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC18.62■□□□□ 0.57
FOXN1O15353 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC18.62■□□□□ 0.57
FOXN1O15353 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
FOXN1O15353 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
FOXN1O15353 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
FOXN1O15353 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
FOXN1O15353 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
FOXN1O15353 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
FOXN1O15353 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
FOXN1O15353 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC18.62■□□□□ 0.57
FOXN1O15353 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
FOXN1O15353 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC18.62■□□□□ 0.57
FOXN1O15353 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
FOXN1O15353 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
FOXN1O15353 LINC00554-201ENST00000564841 3011 ntBASIC18.61■□□□□ 0.57
FOXN1O15353 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC18.61■□□□□ 0.57
FOXN1O15353 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC18.61■□□□□ 0.57
FOXN1O15353 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
FOXN1O15353 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FOXN1O15353 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FOXN1O15353 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
FOXN1O15353 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC18.61■□□□□ 0.57
FOXN1O15353 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
FOXN1O15353 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
FOXN1O15353 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FOXN1O15353 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FOXN1O15353 C2orf27AP3-201ENST00000434123 579 ntBASIC18.61■□□□□ 0.57
FOXN1O15353 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC18.61■□□□□ 0.57
FOXN1O15353 PTK7-212ENST00000476760 902 ntTSL 2 BASIC18.61■□□□□ 0.57
FOXN1O15353 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
FOXN1O15353 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC18.61■□□□□ 0.57
FOXN1O15353 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC18.61■□□□□ 0.57
FOXN1O15353 PGAM1P5-201ENST00000548011 764 ntBASIC18.61■□□□□ 0.57
FOXN1O15353 AC061975.2-201ENST00000581722 295 ntBASIC18.61■□□□□ 0.57
FOXN1O15353 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
FOXN1O15353 AL354718.3-201ENST00000616414 581 ntBASIC18.61■□□□□ 0.57
FOXN1O15353 CR382287.1-201ENST00000623954 586 ntBASIC18.61■□□□□ 0.57
FOXN1O15353 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FOXN1O15353 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FOXN1O15353 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC18.61■□□□□ 0.57
FOXN1O15353 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FOXN1O15353 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FOXN1O15353 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FOXN1O15353 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
FOXN1O15353 SP100-205ENST00000409824 1802 ntTSL 5 BASIC18.6■□□□□ 0.57
FOXN1O15353 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC18.6■□□□□ 0.57
FOXN1O15353 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
FOXN1O15353 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC18.6■□□□□ 0.57
FOXN1O15353 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC18.6■□□□□ 0.57
FOXN1O15353 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FOXN1O15353 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC18.6■□□□□ 0.57
FOXN1O15353 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
FOXN1O15353 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
FOXN1O15353 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
FOXN1O15353 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FOXN1O15353 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.6■□□□□ 0.57
FOXN1O15353 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FOXN1O15353 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FOXN1O15353 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
FOXN1O15353 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FOXN1O15353 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC18.6■□□□□ 0.57
FOXN1O15353 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FOXN1O15353 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FOXN1O15353 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FOXN1O15353 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FOXN1O15353 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC18.6■□□□□ 0.57
FOXN1O15353 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
FOXN1O15353 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC18.6■□□□□ 0.57
FOXN1O15353 MIR769-201ENST00000390225 118 ntBASIC18.6■□□□□ 0.57
FOXN1O15353 MIR1227-201ENST00000408484 88 ntBASIC18.6■□□□□ 0.57
FOXN1O15353 AL627389.1-201ENST00000413508 1182 ntBASIC18.6■□□□□ 0.57
FOXN1O15353 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
FOXN1O15353 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms