Protein–RNA interactions for Protein: O00305

CACNB4, Voltage-dependent L-type calcium channel subunit beta-4, humanhuman

Predicted RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4O00305 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CACNB4O00305 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
CACNB4O00305 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
CACNB4O00305 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
CACNB4O00305 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.43■□□□□ 0.06
CACNB4O00305 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CACNB4O00305 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.43■□□□□ 0.06
CACNB4O00305 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CACNB4O00305 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.43■□□□□ 0.06
CACNB4O00305 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CACNB4O00305 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CACNB4O00305 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CACNB4O00305 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.43■□□□□ 0.06
CACNB4O00305 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CACNB4O00305 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CACNB4O00305 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
CACNB4O00305 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.42■□□□□ 0.06
CACNB4O00305 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CACNB4O00305 LINC02199-201ENST00000506655 2702 ntBASIC15.42■□□□□ 0.06
CACNB4O00305 AC105917.1-201ENST00000506637 2539 ntBASIC15.42■□□□□ 0.06
CACNB4O00305 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
CACNB4O00305 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CACNB4O00305 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CACNB4O00305 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
CACNB4O00305 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CACNB4O00305 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CACNB4O00305 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
CACNB4O00305 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
CACNB4O00305 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CACNB4O00305 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CACNB4O00305 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
CACNB4O00305 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
CACNB4O00305 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CACNB4O00305 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CACNB4O00305 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC15.42■□□□□ 0.06
CACNB4O00305 ATP5G2P4-201ENST00000442175 420 ntBASIC15.42■□□□□ 0.06
CACNB4O00305 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.42■□□□□ 0.06
CACNB4O00305 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CACNB4O00305 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.42■□□□□ 0.06
CACNB4O00305 KRT17P8-201ENST00000540749 863 ntBASIC15.42■□□□□ 0.06
CACNB4O00305 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.42■□□□□ 0.06
CACNB4O00305 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CACNB4O00305 RAB43P1-201ENST00000561790 589 ntBASIC15.42■□□□□ 0.06
CACNB4O00305 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.42■□□□□ 0.06
CACNB4O00305 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.42■□□□□ 0.06
CACNB4O00305 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.42■□□□□ 0.06
CACNB4O00305 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
CACNB4O00305 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
CACNB4O00305 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.42■□□□□ 0.06
CACNB4O00305 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CACNB4O00305 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.42■□□□□ 0.06
CACNB4O00305 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.42■□□□□ 0.06
CACNB4O00305 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CACNB4O00305 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
CACNB4O00305 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CACNB4O00305 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CACNB4O00305 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CACNB4O00305 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CACNB4O00305 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.42■□□□□ 0.06
CACNB4O00305 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
CACNB4O00305 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CACNB4O00305 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.41■□□□□ 0.06
CACNB4O00305 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.41■□□□□ 0.06
CACNB4O00305 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CACNB4O00305 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CACNB4O00305 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CACNB4O00305 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CACNB4O00305 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.41■□□□□ 0.06
CACNB4O00305 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CACNB4O00305 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CACNB4O00305 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CACNB4O00305 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CACNB4O00305 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CACNB4O00305 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CACNB4O00305 TMEM14DP-201ENST00000422205 345 ntBASIC15.41■□□□□ 0.06
CACNB4O00305 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.41■□□□□ 0.06
CACNB4O00305 KRT43P-201ENST00000434019 910 ntBASIC15.41■□□□□ 0.06
CACNB4O00305 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.41■□□□□ 0.06
CACNB4O00305 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC15.41■□□□□ 0.06
CACNB4O00305 IGHV3-71-201ENST00000523324 359 ntBASIC15.41■□□□□ 0.06
CACNB4O00305 TDH-203ENST00000531764 1110 ntBASIC15.41■□□□□ 0.06
CACNB4O00305 HILS1-202ENST00000545329 423 ntBASIC15.41■□□□□ 0.06
CACNB4O00305 AC008735.3-201ENST00000596646 500 ntBASIC15.41■□□□□ 0.06
CACNB4O00305 AL359881.2-201ENST00000602973 570 ntBASIC15.41■□□□□ 0.06
CACNB4O00305 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CACNB4O00305 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CACNB4O00305 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CACNB4O00305 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.41■□□□□ 0.06
CACNB4O00305 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.41■□□□□ 0.06
CACNB4O00305 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CACNB4O00305 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CACNB4O00305 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CACNB4O00305 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CACNB4O00305 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CACNB4O00305 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CACNB4O00305 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CACNB4O00305 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CACNB4O00305 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
CACNB4O00305 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CACNB4O00305 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms